Alpha proteobacterium HIMB5: HIMB5_00004630
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Entry
HIMB5_00004630 CDS
T02250
Name
(GenBank) family 5 extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HIMB5_00004630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apm02000
]
HIMB5_00004630
Transporters [BR:
apm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HIMB5_00004630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFS47231
UniProt:
J9YWC9
LinkDB
All DBs
Position
complement(429513..431078)
Genome browser
AA seq
521 aa
AA seq
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MFENLKKLRTFFISLLSLVFITGFTVSSNAKVLVVGQIAEPKSLDPSTVTAVNDFRIVMN
IYDGLVRYTDGKLEVEPALAKSWNISSDGTVYTFNLRSGIKFHDGSDFNADAVKFNFDRM
LNKDHPYHNTGPFPLSFFFSAIKSVDVVNTNTVKFTLNEPYAPFLSNLAYPTGLIVSPAG
VKKHGKDFGRNPSGTGAFKFKEWKSNERVVVDKNSGYWDGKAGTDAVVFRPITDANTRVA
EMLSGGIDMMVEVPPASLSKFSGSKFSVVEQAGPHVWFLILNAKEGPFADKKVRQAANYA
INKQAIVNDVLEGTAAIAAGPTPPAFAWAYNNSLQPYPYDPAKAKALIKEAGVEGAKLTF
YVTEGGSGMLDPVAMGTAIQADLKAVGFDVEIKTFEWNSFLGEVNPGLEGKADMAEMAWM
TNDPDTLPFLALRTESWPDKGGFNSGYYSNPKVDELLNKARSSTDQAERAKLYKEMQEIV
QEDAPWVFVANWKQNAVTSSKVSNFSLQPSFLLLLKDVKKN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttaaaaaagttaagaacattttttataagtcttctatcattagttttc
attactggttttacagtttcatctaacgccaaagtattggtagtaggtcaaatagctgaa
ccaaaatctttagatccaagcacagttacagctgtaaatgactttagaatagtaatgaat
atctatgatggacttgtaagatatacagacggaaaattagaagtcgaaccagctttagca
aaaagttggaacattagtagtgacggaacagtttatacatttaatttaagatcaggaatt
aagtttcatgatggatcagatttcaatgctgatgcagtgaagtttaattttgatagaatg
ttaaacaaagatcatccttatcataatacaggacctttcccgctatctttctttttttca
gcaatcaaatcagttgatgtagtaaatactaatactgttaagtttacattgaatgagcct
tatgctccttttttatctaacttagcatatccaacaggtttaattgtttcaccagcaggt
gttaaaaaacacggaaaagattttggaagaaatccttctggtactggtgcattcaaattt
aaagaatggaaatcaaatgaaagagttgttgtagataaaaactctggttactgggatgga
aaagctggaacagatgcagttgtttttagacctataactgatgctaacactagagttgct
gagatgctttcaggcggaattgacatgatggttgaagttcctcctgcatcattaagtaaa
tttagtggtagtaaatttagtgtagttgaacaagcagggcctcacgtttggttcttgatt
ttaaatgcaaaagaaggaccttttgctgataaaaaagtaagacaagctgcgaactatgct
attaacaaacaagcaattgtaaatgacgtgttagaaggaacagctgcgatagctgctgga
ccaacacctccagcatttgcatgggcttataacaatagtttacaaccgtatccttatgat
cctgctaaagcaaaagctttaattaaagaagcaggagtagaaggtgcaaaacttactttc
tatgttactgaaggtggttctggaatgttagatcctgttgcaatgggaactgcaatacag
gcagatcttaaagctgtaggttttgatgttgaaatcaaaacttttgaatggaactcattc
ctaggtgaagtaaacccaggtttagaaggaaaagcagacatggcagagatggcatggatg
acaaacgatcctgatacacttcctttcttagcgctaagaacggaatcttggcctgataaa
ggaggatttaactctggatattactcaaaccctaaagttgatgagcttttaaataaagca
agatcatcaactgaccaagcagaaagagcaaaattgtataaagagatgcaagaaattgtt
caagaagatgctccgtgggtatttgttgctaactggaaacaaaacgcagttactagcagc
aaagtgagtaacttctcacttcaaccttcattcttacttttattaaaagacgttaagaaa
aactaa
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