Alpha proteobacterium HIMB5: HIMB5_00006420
Help
Entry
HIMB5_00006420 CDS
T02250
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
apm
Alpha proteobacterium HIMB5
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apm03032
]
HIMB5_00006420
03400 DNA repair and recombination proteins [BR:
apm03400
]
HIMB5_00006420
Enzymes [BR:
apm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HIMB5_00006420
DNA replication proteins [BR:
apm03032
]
Prokaryotic type
DNA Topoisomerases
HIMB5_00006420
DNA repair and recombination proteins [BR:
apm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HIMB5_00006420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AFS47404
UniProt:
J9YU15
LinkDB
All DBs
Position
587674..590253
Genome browser
AA seq
859 aa
AA seq
DB search
MQKTESPKDNNIKLISMHDEMSSSYLSYAMSVIVSRALPDIRDGLKPVHRRILYAMYKGG
YDWSKQFRKSARIVGDVIGKYHPHGDQSVYDALVRMVQDFSMSLPLVDGQGNFGSIDGDP
AAAMRYTETRLSKVAQFLIDDIEKNTISFKSNYDETEKEPSVLPAQYPNLLVNGAGGIAV
GMATSIPPHNLGEIIDGTLALIDNKDITVKQLMKHIPGPDFPTGGVIIGKDIIKQGYSKG
RGSFKVRGQISIEQMKNGRERLVITSIPYQVNKSVLNERIAQLVREKKIEGIKDIRDESS
REGIRVAIDLRNGVEPETVKRQLYKNTQIESSFGFNTLAIVDGKPQTCNLKDFLTNFLSF
REDVVIKKTKFDLQKAEERAHILIGLSVSVENLDKIIKIIRSSKTPDDAKKAILSTKWKI
NKSQKLISLVENKKSKGAYSLSEPQVVAILELRLQKLTALGINEIEVEIKKLAELITKYK
KIISSKKELLKVISDELKNIKEKFSVKRRTDIIDAVLNYDIEETIQKEAVFITVTLQGYI
KRGSLNNVKQQKRGGKGKTGITTRQEDSVVQTLSVNTHTSVLFFSTEGLVYKIKAWKIPE
GSSVSKGKSLFNILPLKNHQSISSIMPFPEDDPESKDLMIIFATAQGKVRKNSLEDFSSI
NASGKIAMKLDPNDRIVGVKICRDDQDAMLSTKLGKCIRFETKKLRVFKGRSSKGIRGID
LAKDDQIVSLSIIQNDKTSKNGKKSSTDKVELKAKEKFILSITENGYGKKTSHYDYRVTN
RGGKGIIGIVNSARNGNIASSFPVYDGDDIIISTNKGRVIRVAVKEIRTAGRNTQGVRII
KLSGDEKVVSATKIDDNLV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaacagaatcacctaaagacaataatataaaactgatctcaatgcatgatgag
atgagctcatcatatttatcttatgcaatgagtgtaattgtttctagagctctacccgat
attagagatggactaaaaccagttcatagaagaattctgtatgcaatgtacaaaggtgga
tatgattggtctaaacaatttagaaaatctgcaagaatagtcggggatgttataggtaaa
tatcatcctcatggagatcaatctgtttatgatgcattagtgagaatggttcaagatttt
tcaatgagtttaccattagtagatggtcaaggtaacttcggttcaatagatggagatcca
gctgcagcaatgaggtataccgaaacaagattgtccaaagtagctcaatttttaattgat
gacatagaaaaaaatacaatttcttttaaaagtaattacgatgaaactgagaaagagcct
tctgttttacctgctcaatatccaaatcttttagtaaacggagcaggtggtatagcagta
ggaatggcaactagtattccaccacataatcttggtgagataattgacggtactttagct
ttaattgataacaaagatattacagttaaacaattaatgaaacacatacctggacctgat
tttccaactggtggtgtaattattggtaaagatattattaaacaaggttacagtaaagga
agaggttcttttaaagtaagaggtcaaatatctatagaacaaatgaaaaatggaagagag
agacttgttataacatcaattccttatcaagttaacaaatctgtattaaatgaaagaata
gctcaattagttagagaaaaaaaaattgaaggaattaaagatattagagacgaatcaagc
agggaaggaataagagttgcaattgatttaagaaatggtgttgaacctgaaactgttaag
agacaactttataaaaatactcaaattgaaagttcatttggttttaacactttagcaatt
gttgatggcaaacctcagacatgtaatctaaaagattttttaacaaattttttatctttt
agagaagatgttgtaattaaaaaaacaaaatttgatcttcaaaaagcagaagaaagagcg
catattcttattggtttatctgtttcggtagagaatttagataaaataattaaaattatt
agatcttcaaaaacaccagatgatgcaaagaaagcaattttatctactaaatggaaaata
aataaatcacagaaattaatttctttagttgaaaataaaaaatctaagggggcttatagt
ttatctgaacctcaagtagttgctatcttagaattaagattacaaaaattaacagcttta
ggaataaatgaaattgaagttgaaataaagaaacttgcagaattaataacaaaatacaaa
aagattatttcttcgaaaaaagaacttttaaaagttattagtgacgaacttaaaaatatt
aaagaaaaattttcagtaaaaaggagaactgatatcatagatgcggtgttaaattatgat
attgaagaaacaattcaaaaagaagctgtattcataacagttacacttcaaggttatatt
aaaagaggatcacttaataacgttaagcaacaaaaaagaggtggaaaaggaaagactgga
ataacaacaagacaagaagactcagttgttcaaacattgtctgttaatacccatacatct
gtattgtttttttcaacagagggattagtttacaaaattaaagcatggaaaattcctgag
ggatcatctgtttcaaaggggaaatctttattcaatattttacctttaaaaaaccaccag
tctataagctctattatgccatttcctgaagacgatccagaatcaaaagatttgatgatt
atatttgctactgcacaaggaaaagttagaaaaaatagtctagaagatttttcttcaatt
aacgcttctggaaaaattgcaatgaaattagaccctaacgatagaatagttggtgtaaaa
atttgtagagatgatcaagatgcaatgttaagtactaaactaggtaaatgtattagattt
gaaactaagaaattaagagtttttaaaggtagatcttctaaaggaataagaggtattgat
cttgctaaagatgatcaaattgtatctctatcaattattcaaaacgataaaacatctaaa
aatggcaaaaaatcatctactgataaagtggaattaaaagctaaggaaaaatttatttta
tcaataacagaaaatggttatggaaaaaaaacatctcattatgactacagagttactaat
agaggcggcaaaggtataattggtattgtaaattctgcaagaaatggaaacatagcatct
tcttttccagtttatgatggtgatgatattataatttcaactaataaaggaagagttata
agagttgctgttaaagaaataagaacagctggaagaaatactcaaggtgttagaattatc
aaattatctggtgatgaaaaagttgtttcagctacgaaaattgatgataacttagtttaa
DBGET
integrated database retrieval system
