Alpha proteobacterium HIMB5: HIMB5_00009740
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Entry
HIMB5_00009740 CDS
T02250
Name
(GenBank) Binding-protein-dependent transport system inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HIMB5_00009740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apm02000
]
HIMB5_00009740
Transporters [BR:
apm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HIMB5_00009740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AFS47726
UniProt:
J9YXQ0
LinkDB
All DBs
Position
complement(896884..898137)
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AA seq
417 aa
AA seq
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MSSETNKILTTDGIPLEVSLKKAERKNKIKAFLLVAPLLFFLIITYVFPIGDMLLRSVDD
KMVTQMLPKTFKAMETWDGQELPDEEVFAAFHEDFIKLVDEKREGKLSTQLNYTKNGFKS
IIKKLRRASKKFEEGNYKEQIMSVHKRWADVEYWRAIKRRAPEVTNQKYLKAMDMYKNEE
GKIVSVEEDRRIHRVLWLRTLEIAFFVTVFCFLMAYPIAHLLATLPMKYSNLLMICVLLP
FWTSLLVRTASWMILLQQQGVVNDFFVGIGLVDDDNRPEMMYNKTGSYVAMTQILLPFMV
LPLYSVMKTISPSLMRAGKSLGGTPFVAFWKVYFPLTIPGIGAGCLLVFILAIGYYITPA
LVGGASGTLISNQIAFHMKSTLDWSFASAMGLMLLTGVLVIYWLYNKIVGIDNIKLG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagaaacaaataaaattttaacaacagacggaataccgttagaagtaagttta
aaaaaagctgaaagaaaaaataagattaaagcttttttacttgttgctcctttattattc
tttttaataatcacttatgtctttccaataggtgatatgttgttgagaagtgttgatgat
aaaatggtaactcaaatgcttccaaaaacttttaaagctatggaaacatgggatggtcaa
gagttacctgatgaagaagtttttgctgctttccatgaagattttataaaattagttgat
gaaaaacgtgaaggtaaattatctacacaacttaattatacgaaaaatggatttaaaagt
atcattaaaaaattaagaagagcctccaaaaaatttgaagaaggaaattataaagaacaa
ataatgtcagttcataaaagatgggctgatgttgaatactggagagcaattaaaagaaga
gctccagaagttacaaaccaaaaatatttaaaagctatggatatgtataaaaatgaggaa
ggaaaaattgtaagtgttgaagaagatagaagaattcatagagttttgtggttaagaact
ttagagattgctttttttgtaacagttttttgtttcttaatggcttacccgatagctcat
ttgctagctactttaccaatgaagtacagtaacttgctaatgatctgcgtactgcttccg
ttttggacatcactacttgtaagaacagccagttggatgattttgttacaacagcaaggg
gtagtaaatgatttctttgttggaatagggctagtggatgacgataacagacctgagatg
atgtacaataaaacaggaagttatgttgcaatgacacagatcttattgccatttatggtt
ttaccactttacagtgtgatgaaaactatctcgccaagtttaatgagagctggaaaatca
ttgggtggaacaccttttgtagcattctggaaagtgtacttccctttaacaatcccagga
attggagcaggatgtttattagtgtttattttagcgattggatattacataacacctgct
ttagttggtggcgcatctggtactttaataagtaatcaaattgcctttcatatgaagagt
acactcgattggagctttgcttctgcgatgggcttaatgttgttaactggggtcttagtt
atttactggctgtacaataaaatagttggaattgataatattaaattaggataa
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