Alpha proteobacterium HIMB5: HIMB5_00011680
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Entry
HIMB5_00011680 CDS
T02250
Name
(GenBank) RNA-binding protein with S1 RNA-binding domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HIMB5_00011680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
apm03011
]
HIMB5_00011680
Ribosome [BR:
apm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HIMB5_00011680
Bacteria
HIMB5_00011680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AFS47912
LinkDB
All DBs
Position
1080514..1082235
Genome browser
AA seq
573 aa
AA seq
DB search
MEIYKDLSNPATQEFEKLLNSQLSKVSIEEGKVIEGTINKITDKFVFLLIEGLKSEPVID
VNELKTLGLQEKLKLGEKISVLLERIEDRNGEIVVSASKAQKIKGWDKLVKAYEENEPIM
GKIVSKCKGGCIVEHIETGSLMFLPGSQISDKPLKDISHLMNEPQKFALIKLDKLRGNAC
VSRREIISSFKKEDKAKIIEKFKVGDIIKNAEVKGYSSFGCFFNVNNEIDVLVHLQEISY
SRISHPEEVFNIGEKHDLKVISIDKEKLQVGCSIKQLSPDPFEHIDNYELNQVYKVRIVK
LMDFGAFCELEPGLTTLLHSSEMSWNKKNISSKKLFKVGDEIDCVITEIDKDKRRVAISH
KLTKKNPFEEFEIKFPIGSTIKGSITNKNEYSLFINFKEFDIDAFLHCNDLTYLGDSEEE
LKKYKKGDELTVKILEIKKDEQKIRVGLRQIGTDPFDWFNDKKINQIITVKIISTDNKGL
IVRPEGCEMDFHIKKSNIAINQSDARPSRFTGGEKIDCAIAELNIDKRKVVLSMKLLEQI
EKEEALEKYGTEGSGKNLPFSSLSEDLKKKKEK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttataaagatctttctaatcctgctactcaagagtttgaaaaacttttaaat
agtcaattatcaaaagtaagtattgaagaaggtaaagtaattgaaggaacaattaacaag
ataactgataaatttgtttttctattaattgagggattaaaaagtgaaccagtaatagat
gttaatgagctaaaaaccttaggcttacaagaaaaattaaaattaggtgaaaaaatttct
gtgctccttgaaagaattgaagatagaaatggtgagattgtagtatcagccagtaaagct
caaaaaattaaagggtgggataaactagttaaagcttacgaagaaaatgaacctattatg
ggtaaaattgtttcaaaatgcaaagggggttgtattgttgaacatatagaaactggttca
ttaatgtttttacctggttctcaaatcagcgacaaacctctaaaagatattagtcattta
atgaatgaacctcaaaaatttgctcttattaaattagataaattaagaggtaacgcttgc
gtgtcaagaagagaaataatatcttctttcaaaaaagaagataaagcaaaaataatagaa
aagtttaaagttggcgatattataaaaaatgcagaagtaaaaggttacagctcatttggg
tgcttctttaatgtaaacaatgaaattgatgtgttagttcatcttcaagaaatatcctac
tctaggataagtcatcccgaagaggtgtttaacattggtgaaaaacatgatttaaaggtt
atatcaatagataaagaaaaattacaagttggttgctctattaaacaactatccccagat
ccttttgagcatattgataattatgaattaaaccaagtctataaagtaagaattgttaaa
ctgatggactttggggcgttttgtgaactagagcctggattaaccacgcttttacactca
agtgaaatgtcgtggaataaaaaaaatatttcctcaaaaaaattatttaaagttggtgat
gaaattgattgtgtgataaccgaaattgataaagataagagaagagtagcaatttctcat
aaactaacaaaaaaaaatccattcgaagaatttgaaattaaatttcccattggctctacg
attaaaggctcaataactaataaaaatgaatattcattatttattaattttaaagaattc
gatatagatgcatttttacactgtaatgatttaacttaccttggagatagtgaagaagaa
ctaaaaaaatataaaaaaggtgatgaattgacagttaagatactagaaataaaaaaagat
gaacaaaaaataagagttggattaagacaaataggaactgatccatttgactggtttaat
gataaaaaaataaatcaaattattactgtaaaaattatatctacagataataaaggtttg
attgtaagacctgaaggatgtgaaatggattttcatattaaaaaaagtaatattgcaatt
aatcagtctgatgctcgaccatcaagatttactggaggtgaaaagattgattgtgcgata
gctgaacttaatatcgacaagagaaaagttgttttaagcatgaaattattagaacaaatt
gaaaaagaagaagctttagaaaaatatggtactgaaggttcgggaaaaaatctacctttc
tcatctctttctgaagatttaaaaaagaaaaaagaaaaataa
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