Alpha proteobacterium HIMB5: HIMB5_00012450
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Entry
HIMB5_00012450 CDS
T02250
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm00300
Lysine biosynthesis
apm01100
Metabolic pathways
apm01120
Microbial metabolism in diverse environments
apm01230
Biosynthesis of amino acids
Module
apm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HIMB5_00012450
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
apm01002
]
HIMB5_00012450
Enzymes [BR:
apm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HIMB5_00012450
Peptidases and inhibitors [BR:
apm01002
]
Metallo peptidases
Family M20
HIMB5_00012450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AFS47986
UniProt:
J9YYG3
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All DBs
Position
1137188..1138342
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AA seq
384 aa
AA seq
DB search
MQKINELQLAKELIRFPSITPVDAGVMGHLEKKLKSLGFKTKILTFSEKNTKPVKNLYAR
LGNKNPNLCFAGHLDVVPPGNIKDWTINPFKPALKKGHLIGRGANDMKSSIAAFISAVSK
FISNNKFNGSISLLITGDEEGIAVNGTKKVVDYLRKKKEKINFCIVGEPTNPNKLGEMIK
IGRRGSMNGKLTIHGIQGHVAYPHRAKNPITSLIKILNEFKDIKFDKGTKDFQPSNLEIT
KMNINNNADNVIPAAASATFNIRFNNKHSSSSIKNKLNKIIKKIASKNKVKFEINYRVSG
EAFLSKPNATTYMIRDVVKKVTKVNPKLSTTGGTSDARFIRKISPCLEFGLVGKTMHKVD
EAVSISDLKRLTEIYQKILKNYFN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaatgaactgcagttagccaaagagctaataagatttccatctattaca
cccgtcgatgcaggcgtcatgggtcatttagaaaaaaaattaaaatcacttggttttaaa
actaagattttaactttctctgaaaaaaatacaaagccggtaaaaaatttatacgcaaga
cttgggaacaaaaatccaaacctttgttttgctggtcatttagatgtggtgccgccagga
aatattaaagactggacaattaatccttttaaaccagcgttaaaaaaaggacatttaatt
ggtagaggtgcaaatgatatgaagagctcaattgcagcgtttatttctgctgtcagtaaa
tttatctcaaataataaatttaatggatctatcagcttgttaattacgggtgatgaagaa
ggtattgcagtaaatggtacaaaaaaagttgttgattatttgagaaagaaaaaagaaaaa
ataaatttttgtatagttggtgaacctactaatccaaataaattaggagaaatgattaaa
attggaagacgtggtagcatgaatggcaaacttactattcatggcatacaaggtcatgtt
gcttatccacatagagcaaaaaatcctattacttcgttaataaaaattttaaatgaattt
aaagatattaaatttgataaaggaacgaaagattttcaaccttctaatttagaaattaca
aaaatgaatataaataataatgctgataatgtaattcctgcggcagcatcagctacgttt
aatatcagatttaacaacaaacattcatctagttctattaaaaataaattaaataaaatt
ataaaaaaaatcgcttcaaaaaataaggtgaaatttgaaataaattatagagtttcaggt
gaggctttcttgtcaaaaccaaatgctacaacttatatgattagagatgttgtaaaaaaa
gtaactaaagtgaatccaaaattgtctactactggcggaacatcagatgcaagatttatt
agaaaaataagtccctgtcttgaatttggattagtaggcaaaacaatgcataaagtagac
gaggcagtatcgataagcgacttgaaaagacttacagaaatctaccaaaaaattcttaag
aattatttcaattga
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