Alpha proteobacterium HIMB5: HIMB5_00013300
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Entry
HIMB5_00013300 CDS
T02250
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
apm
Alpha proteobacterium HIMB5
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apm03021
]
HIMB5_00013300
03009 Ribosome biogenesis [BR:
apm03009
]
HIMB5_00013300
Transcription machinery [BR:
apm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HIMB5_00013300
Ribosome biogenesis [BR:
apm03009
]
Prokaryotic type
rRNA transcription factors
HIMB5_00013300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_2
HHH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AFS48068
UniProt:
J9YX03
LinkDB
All DBs
Position
complement(1219281..1220873)
Genome browser
AA seq
530 aa
AA seq
DB search
MGVSPFFFGVNKNMLNKRADKLELLRIAEAVALEKSIDKELIISSMETGIAKAAKSKFGQ
ENEIKVVINRDNGDIELFRKLTIVDNPENTNTEIKLADAISINDENKSKTIGDEVLQPLP
SFDFGRIAAQTAKQVISFNVREAERERQYNDFIDKKDTILSGIVKRLEFGNVIVDLGRTE
AIIQKNEMIPRENVKAGDRVKAYCYDVRREPRGQQIFLSRAHPKFMEKLFVQEVPEIYDG
LIEIKSSSRDPGSRAKICVRAVDTSLDPVGACVGMRGSRVQAVVNELQGEKIDIVNFSED
PAVLVSNALSPAEVQRVNVDLERKKLDVILTEENLSKAIGRRGQNVRLATKLLNYEINIM
TDQEDSEKRQQEFKEKTDNFVKNLELDETLGQLLVAEGFSTIDDIKDSPLENLTKIEGIE
EDTAKALIERAQEFHEKDKEEISERIKGLGLSEDLRSLKGLTPGMLMTLGEQKILTLEDF
ADLASDELTGGFDFVKGERVKIQGYLEDFALSKTEADDLIMSARNIVYKD
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttagcccatttttttttggagtaaacaaaaatatgttaaataaaagagctgat
aaattagaattattgagaatagcagaagctgtagcactagaaaaatcaatagataaagaa
ctgattataagttcaatggaaactggtatagcaaaagcagcaaaatctaaatttggtcaa
gaaaatgagattaaagttgttataaatcgagacaatggagatattgagctttttagaaaa
ctaacaattgtagataatccagaaaatacaaatacagaaataaaattagcggatgcaata
agcattaatgatgaaaataaatcaaagaccattggggatgaagtattgcaaccattacca
tcttttgactttggaagaatagctgctcaaactgcaaaacaagtaataagttttaatgtt
agagaggctgaaagagaaagacagtacaatgattttattgacaaaaaagatactatttta
agtggaattgtaaagcgtttagagttcggaaatgtaattgttgatctgggaagaacggaa
gcaataattcaaaaaaatgaaatgatcccaagagaaaatgttaaagcaggagatagagta
aaagcatattgctatgatgttagaagagaacctagaggtcaacagatttttttatccaga
gcacacccaaaatttatggaaaaactttttgttcaagaggttccagaaatatatgatgga
ttgatcgaaattaaatcttcttcaagagacccaggaagtagagcaaaaatttgtgttaga
gcagttgatacttcattagatcctgtaggtgcttgtgttggtatgagaggatcaagagtt
caggccgtggtaaatgaattacaaggagaaaaaattgatatcgttaatttctctgaagac
ccagcagtattagtttcaaatgctttatcaccagcagaagttcaaagagttaatgttgat
ctagagagaaaaaaacttgatgtaatacttactgaggaaaacttaagcaaagctattggt
agaagaggtcaaaatgttagacttgcaacaaaattgcttaactatgaaattaatattatg
actgatcaagaagattctgaaaaaagacaacaagagtttaaagaaaaaacagataatttt
gtaaaaaacttagaacttgatgaaacacttggtcaacttttggtagcagaaggattttca
acaattgatgatattaaagatagtccattagaaaatctgacaaagatagaaggtattgaa
gaagatactgcaaaagcgcttatagaaagagcacaagaatttcatgagaaagataaagaa
gaaatttctgaaagaattaaaggacttggtctttctgaggatcttagaagtttaaaagga
ctaacaccaggtatgcttatgaccctgggtgaacaaaaaattttaactttagaagacttt
gcagatcttgcatcagatgaacttactggtggttttgattttgtaaaaggagagagagtg
aaaattcaaggatatttagaggattttgctttatcaaaaactgaagctgatgatcttata
atgtcagcaagaaatatagtttacaaagattag
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