Alpha proteobacterium HIMB5: HIMB5_00013680
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Entry
HIMB5_00013680 CDS
T02250
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
apm
Alpha proteobacterium HIMB5
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apm03016
]
HIMB5_00013680
Transfer RNA biogenesis [BR:
apm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HIMB5_00013680
Prokaryotic type
Methyltransferases
HIMB5_00013680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
Dynamin_N
FeoB_N
RsgA_GTPase
MMR_HSR1_Xtn
ABC_tran
cobW
AIG1
AAA_18
AAA_28
HisKA
Ras
DUF5097
Roc
AAA_24
Arf
AAA_29
GCV_T
Motif
Other DBs
NCBI-ProteinID:
AFS48106
UniProt:
J9YYW9
LinkDB
All DBs
Position
complement(1256720..1258054)
Genome browser
AA seq
444 aa
AA seq
DB search
MTIFALSTGSNKSGIAIIRISGPETKRALSKLTKIKLPNPKEAKLCKIYNPENNELLDQG
MLLWFPGPNSYTGEDLAEFHIHGSNAVVSALLRSLSKIENCRLAEPGEFTKIAFENGKIN
LLNIEALSDLISSETDLQRRQAINLLSGKVSKKYEELRNRLLKILANVEAKIDFPDEDLP
KDILKNIKNETHDIIKIINSILNDNKVGEKIRNGFKIVIVGPTNAGKSSLLNYLSKREVA
IVSEIEGTTRDTIEVSLNLDGYPVLISDTAGIRETNDQIEKKGVQIAIDKAQNADMKIIL
LDAKNPHFKGFFDQLYDENSLIVINKSDLISDDFDTNSIGSLEHILISVREETNLNTFVE
EIKKKLKHKFAINENILISRERHRHNLEKCISHLKIFLEKKSINEFDKAAEDLRLATRYL
GRVVGDVDVEEVLGKIFNDFCIGK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactatttttgccttatctacaggatcaaataaatcaggcatagccataattagaata
tcagggcccgaaaccaaaagagcgttaagcaaattaacaaaaattaagttaccaaatcca
aaagaagctaaactatgtaaaatatataatcctgaaaataatgaattattagatcaagga
atgctgttgtggtttcctggaccaaatagctacacaggagaagatttagcggaattccat
atacatgggagtaatgcagttgtaagcgctctactcagatctttgtcgaaaatagaaaat
tgcaggctggcagaacctggagagtttacaaaaattgcttttgaaaacggcaagataaac
ttgcttaacatagaagctttatctgaccttatttcatctgaaactgatctacaaagaaga
caagccataaatcttttaagtggcaaggtttcaaaaaaatacgaagagttgagaaataga
ttattaaaaattttagctaatgttgaagcaaaaattgattttccagatgaagatttacca
aaagatattttgaaaaatattaaaaatgaaacgcacgatataattaaaattataaattcg
atcttgaatgataataaagttggagaaaaaattcgtaacggatttaaaattgtcattgtg
ggcccaacaaatgcaggcaaatcaagcttattaaattacttatcaaaaagagaagttgct
attgtttctgaaattgagggcacgactagagacacaattgaagttagtttgaatttagat
ggataccctgtgctcatctcagatacggctggaatacgggagacaaatgatcaaattgaa
aagaagggtgttcaaattgctatagataaggctcaaaatgccgatatgaaaataatatta
ttagatgcaaaaaacccacattttaaagggttttttgaccagttatatgacgaaaattct
ttaattgtaataaataaatccgatttaatttcagatgattttgatacaaattccattggt
agtctggaacatattttaatttcagttagggaagaaacaaatcttaatacttttgttgaa
gaaataaaaaaaaagttaaaacataaatttgctattaatgaaaatattttaatatcaagg
gaaagacataggcacaatttagaaaaatgtatttcgcatttaaaaatctttttagaaaaa
aaatcaataaatgaatttgataaagcggcagaggatttaaggttggcaactagatacctt
ggtcgagttgttggagatgttgatgtcgaggaagtcttaggaaaaatttttaatgatttt
tgtattggaaaataa
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