Alpha proteobacterium HIMB5: HIMB5_00014180
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Entry
HIMB5_00014180 CDS
T02250
Name
(GenBank) FAD-binding protein, DNA photolyase family,Deoxyribodipyrimidine photo-lyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
apm
Alpha proteobacterium HIMB5
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apm03400
]
HIMB5_00014180
Enzymes [BR:
apm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HIMB5_00014180
DNA repair and recombination proteins [BR:
apm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HIMB5_00014180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AFS48155
UniProt:
J9YZ11
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All DBs
Position
1298275..1299765
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AA seq
496 aa
AA seq
DB search
MKLFFILGNQLFPLNYLDKFKKDHLFFLAEDYELCTYEKHHKQKILLFLSSMRSYLDRLR
KDKFKTEYLDITNKTFKSSYTDKLKSIIKSKKITEVTSFEIEDKFFENKVSNFFKKEKIK
WNIVQTPMFLNSRDNFKKYLNKSKKPFMATFYKDTRRELNILMDKQGNPQGGKWSFDEDN
RNKLPKNISIPKFPNINETTHTKKLKPIIEKNFKDHPGNTNQFWFATEYDDVLKLLNFFI
KEKSNLFGDYEDAVDQKDNILFHSALSPYINLGIITPEFIIKKILDFHKKNKIRMNSLEG
YVRQVIGWREFMRGIYQGYSKEMETKNFFNQNRKMKKSWYEGTTGLPPLDYAIKNAKNYG
WSHHIERLMILSNIMNLCEIKPTIVYKWFMEMFVDSSDWVMVPNVYGMGLFSDGGIFATK
PYICGSSYFMKMMDFKKGDWCNTMDGLYWRFIDRNRKFFLTNPRLSMMVRIFDKMKIERK
KLILHEAQNFINKNTS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgttttttatacttggcaaccaattatttccattaaattatttagataaattt
aaaaaagatcacttattttttttagcagaggattacgaactttgtacatatgaaaaacat
cataagcaaaaaatattattatttttatcatcaatgcgatcatatttggatagacttaga
aaagataaatttaaaacagaatatttagatattaccaataaaactttcaaatcaagttac
actgataaattaaaatcaataattaaatcaaaaaaaattactgaagttacaagttttgaa
atagaagataaattttttgaaaacaaagtttcaaatttttttaaaaaagaaaaaataaaa
tggaatattgttcaaactccaatgtttcttaattcgagagataattttaaaaaatatcta
aacaaatctaaaaagccgtttatggcaacattttacaaagatactaggagagagcttaac
atattgatggataaacaaggcaatccacaaggtgggaaatggagttttgatgaagacaat
agaaacaaattacctaagaatatatcaattcctaaatttccaaatattaatgaaactaca
catacaaaaaagttaaaaccaataattgaaaaaaattttaaagatcacccaggcaataca
aatcagttctggtttgcaaccgaatacgatgatgttttaaagttattgaacttttttatt
aaagagaaatcaaacttatttggtgattatgaggatgcagttgatcagaaagataatatt
ttatttcatagtgctttaagtccttatataaatttgggaataatcacgcctgaattcata
ataaaaaaaattttagactttcataaaaaaaataaaattagaatgaactcacttgagggc
tatgtaaggcaagtcattggatggagagaatttatgagaggaatttaccagggctattca
aaagaaatggaaacaaaaaatttctttaatcaaaatagaaaaatgaagaaaagttggtat
gaaggaactactgggcttccaccattagattatgcaattaaaaatgcaaaaaattatgga
tggtcacaccatatagaaagattaatgatcctctcaaacattatgaacctttgtgaaatc
aaaccaacaattgtttacaaatggtttatggaaatgttcgttgattcatctgattgggta
atggttccaaatgtttatggaatgggtttatttagtgatggtggaatttttgcgactaaa
ccttatatctgtggatcaagctatttcatgaaaatgatggattttaaaaaaggtgattgg
tgcaacacaatggatggtctttattggagatttattgatagaaatagaaaatttttcctt
acaaatccaaggctatcaatgatggtaagaatttttgataaaatgaaaattgaaagaaaa
aagttaattttacatgaggcacaaaattttattaataaaaatacttcctaa
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