Alpha proteobacterium HIMB5: HIMB5_00014270
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Entry
HIMB5_00014270 CDS
T02250
Name
(GenBank) FAD-binding protein, DNA photolyase family
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
apm
Alpha proteobacterium HIMB5
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apm03400
]
HIMB5_00014270
Enzymes [BR:
apm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HIMB5_00014270
DNA repair and recombination proteins [BR:
apm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HIMB5_00014270
Prokaryotic type
HIMB5_00014270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AFS48164
LinkDB
All DBs
Position
complement(1305088..1306233)
Genome browser
AA seq
381 aa
AA seq
DB search
MNFIPTRASALEKLNYFIENGLKDYSKARNFDYGPDKRDNTSCLSPYISHGAINEIEVIK
KSLNKFSFSKNEKFIQEVLWRTYWKGWLELRPNVWTDFLVELNSIKNKYKDNENYLDAIE
GNTNIECFNYWVKELKDTNYLHNHTRMWFASIWIFTLDLPWQLGAEFFLEHLLDGDPASN
TLGWRWVAGIQTQGKHYLASEWNIKKFTNNRFNQIKLNENATPKISEKTYTIIKQDFINP
SIDEQKTLVIFDNNLSFESSNFTDTQFKKIILIKQNNENREIKLSENVVKFKELLNEDQK
KRLKQKNIECQILDINDLKNIDEDFYILYPSIGESLDFLIKLNLKNYQFLYRSLDSFSWQ
FCNKGFFNFKNHIPKIVSKFT
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaattttattcctacaagagcttcagctctagaaaaattaaattatttcattgaaaat
ggattaaaagattattcaaaagccagaaactttgattatgggcctgataaaagagacaat
acatcttgtctttcaccctatatttcacatggtgctataaatgaaatcgaggttattaaa
aaatcactaaacaaattttctttttcaaaaaatgaaaaatttattcaagaagttttatgg
agaacatattggaaagggtggttagaattacgtccaaatgtatggacagattttttagta
gaattgaattcaataaaaaacaaatacaaggataatgaaaattatcttgatgctattgaa
ggtaatacaaatattgaatgttttaattattgggtaaaagaactaaaagatacaaattat
ctacacaaccataccaggatgtggtttgctagtatttggatttttacattagatttacct
tggcagctgggagcagaattttttttagaacatttattagacggtgatccagcttcaaat
acgcttggatggcgatgggttgcaggtatacaaactcaaggaaagcattatttggcttct
gaatggaatattaaaaaatttacaaataatagatttaatcaaataaagcttaatgaaaac
gctactcctaaaattagtgaaaaaacatatacgataatcaaacaagactttatcaatcca
tcaattgatgaacaaaaaactttggtaatttttgataataatctttcttttgaaagttca
aatttcactgacactcaatttaaaaaaattattctaattaaacaaaataatgaaaataga
gaaataaagttaagtgaaaacgtagtgaaatttaaggagcttttaaatgaagatcaaaaa
aaacggttgaaacaaaaaaatattgaatgtcaaatattagacatcaatgatttaaaaaat
attgatgaggatttctatattttatatccatcaattggagaaagtttggattttttaata
aagcttaatcttaaaaattatcaatttttatacagaagcttagattctttttcttggcaa
ttctgtaacaaaggtttttttaattttaaaaatcatattcctaaaatcgtaagcaagttt
acataa
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