KEGG   Pseudarthrobacter phenanthrenivorans: Asphe3_06580
Entry
Asphe3_06580      CDS       T01435                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
apn  Pseudarthrobacter phenanthrenivorans
Brite
KEGG Orthology (KO) [BR:apn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apn03400]
    Asphe3_06580
Enzymes [BR:apn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Asphe3_06580
    5.6.2.6  RNA 3'-5' helicase
     Asphe3_06580
DNA repair and recombination proteins [BR:apn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Asphe3_06580
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr WHD_3rd_Lhr DEAD Helicase_C AlkZ-like ResIII EutK_C DUF6406 AAA_22
Other DBs
NCBI-ProteinID: ADX71867
UniProt: F0MBI5
LinkDB
Position
complement(671755..676749)
AA seq 1664 aa
MNPEQPAGPMAQFSRPTRDWFLGAFTEPTPAQEGAWRAISSGAHALVVAPTGSGKTLAAF
LWALDRLLISAAEAPDVQQPDSNAPAKGRRVRRPKRATRVLYISPLKALGVDVERNLRSP
LIGITQTAKRLGLPAPLITVGVRSGDTTAADRRALLSNPPDILITTPESLFLMLTSKARE
TLAGVDTIIIDEVHAVAGTKRGAHLAVSLERLDALLPAPAQRIGLSATVEPKDLVAQFLA
GSAPVEIVAPPAKKNWDLTVSVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEKIV
DLVLANQSTIVFANSRRLSERLTARLNEIYAERQLVAVGGGWDDPVPGGLEAAAAPGPGV
PPPGVPASTATPAHMMAQAGSSAGADPVLARAHHGSVSKDQRALIEDDLKSGRLRCVVAT
SSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGEVSQGVLFPKHRADLVHTAIT
VERMLDGKIERLSIPANPLDILAQQTVAATALGSIDVEEWFATVRRSAPFASLPRSAFEA
TLDLLAGRYPSDEFAELRPRIIWDRNAGTIEGRPGAQRLAVTSGGTIPDRGLFGVYIIGT
EVEGSSSPSADGKPSPAPKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDITHDRVLV
SPAFGQPGKLPFWKGDSLGRPVDLGRALGAFVRELSASDVGPATERCKASGLDEFAANNL
IQYLSEQKLATEVVPSDTTLVVERFHDELGDWRVILHSPFGMPVHAPWALAVGQRLHQRY
GLDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFASRFRECAA
RALLLPRQTPGKRQPLWQQRQRSAQLLDVARKYPTFPIVLETVRECLQDVYDLPALKDIA
ASVERRELRIVQTTTSQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDSTLLNELL
GRVELRELLDAKVIEATERELQRLAPDRRVRGVEGVADLLRLLGPLAPEEVAERLEPAAA
PEPGPVVEPVETEPVHETHAEPAQAEAHLVALQRANRAIKVNIGGAERFAAVEDAARLRD
AIGVPLPMGVPLAFIEPVADPLDDLVSRYARTHGPFTAAEAAARLGLGVAVVGTALKRLA
ADGRVVEGEFRPHPAPPETGSSAEDGTQPAAAEPPANLPQHALASEWCDAEVLRKLRRRS
LAALRAEVEPVDAAAYGRFLPAWQHVRTPGGGRGQPSLRGLDGIITAVDQLSGVPIPASA
WEPLVLAGRVSNYQPAMLDELMAAGEVLWSGAGALPGNDGWISLHLADSAELTLNPAIDY
EPGDAQERLLDHLRTNGGGYFFRQLTEVAGGMDSVLSDQEVVTALWDLAWAGRITGDTFA
PVRALIAGGHTAHRQVARAPRARAPRLSRLGRSHGTGLMGSPGLAGGRYGASGGAAATPP
MAAGRWSALPQPELDPTIHARATAELLLDRYGVVTRGSVMAEQILGGFGLMYKVLARLEE
AGRCRRGYFIEHLGAAQFAVPATVDRLRSYSEDAQLAKPEPVALALAATDPANPYGAALP
WPALQDDAGTGHRPGRKAGALVVLVDGALVLYVERGGKTLLAFSDDQAVLAAAGTALVGV
VTRGAVDKLIMEKVNGHGILDTPVAAALSSAGAYSTPKGLRIRA
NT seq 4995 nt   +upstreamnt  +downstreamnt
atgaacccggaacagcccgccgggcccatggcccagttcagccggcccacgcgcgactgg
ttccttggcgccttcaccgaacctactccggcacaggagggcgcctggcgggcgatttcc
tccggcgcccatgccctggtggtggctcccaccggttccggaaagacgctggccgcgttc
ctgtgggcgttggaccggcttcttatttcagctgcggaagcgccggacgtgcagcagccg
gactcgaatgccccagccaagggcaggcgggtccggaggcccaagcgcgccacccgcgtc
ctctacatctcccccttgaaggccctgggcgtggacgtggaacggaacctgcgctcgccg
ctgatcggcatcacccagaccgccaagcggctcgggctgccggcacccctcatcaccgtg
ggcgtgcgctccggcgacaccaccgcggcggaccggcgcgccctgctgagcaacccgccg
gacatcctcatcaccacccccgaatcgctgttcctgatgctcacctcaaaagcccgggag
accctggccggggtggacaccatcatcatcgatgaagtccacgcagtggccggcaccaag
cgcggcgcccacctggccgtctcactcgaacggctggatgccctgctgcccgcgccggcc
cagcgcatcggcctgtccgcaaccgtggaacccaaggacctcgtggcacagttcctggcc
ggttcggccccggtggagatcgttgccccgcccgcaaaaaagaactgggacctgacggtc
tcggtcccggtggaggacatgtccgatctccagggcgcagccggcgccttcgactccggc
ccggcttccgggctgcagccgcaggcctccatctggccgcacgtggaagagaagatcgtg
gacctggtgctcgccaaccagtccaccatcgtgtttgccaactcccgccgcctgtccgag
cggctcacggcacggctcaatgaaatctatgcggaacggcagctggtggctgtgggcggt
ggctgggacgatccggtcccgggagggctggaagctgcagccgccccgggaccgggcgtg
ccgccaccgggagttcccgcgtccacagccacgcccgcgcacatgatggcgcaggcagga
agttcggcgggcgcggatcccgtactcgcgcgggcgcaccacggctctgtctcgaaggac
cagcgggcgctgatcgaggacgacctgaaatccggccggctgcggtgcgtggtggccact
tcgtccctggaacttggcatcgacatgggcgccgtggacctggtggtgcaggtggagtcg
ccgccgtccgtggccagcggcctccagcgggtgggccgggcggggcaccaggtgggggaa
gtctcccagggcgtgctcttccccaagcaccgcgcggacctggtgcataccgccatcacg
gtggaacggatgctggacggcaagatcgagcggctcagcatccctgccaaccccctggac
atcctggcccagcagactgtcgctgccaccgctttgggcagcatcgacgttgaggaatgg
ttcgccaccgtgcggcgttccgcccccttcgcctcgctcccccgctcagcgttcgaagcg
acccttgacctgctggccggccgctacccgtccgacgaattcgccgagctccggccccgc
atcatctgggaccgcaatgcgggcaccatcgaaggcaggccaggcgcccagcgcctggcc
gtgacctccggcggcaccataccggaccgcggcctgttcggcgtctatatcatcggcacg
gaagtggaggggtcctcgtccccgtccgcggacggcaagccctcccctgcccccaagggc
ggacggcgcgtgggcgagctggacgaggaaatggtgtacgaatcccgggtgggggacgtc
tttgccctgggcgccaccagctggaaaatcgaggacatcacgcacgaccgcgtgctggtc
tcccccgcgttcggccagccggggaagcttcccttctggaagggcgattcgctgggccgc
cccgtggacctggggcgcgccctgggcgcctttgtccgcgaactgtcagcgtccgacgtc
ggccctgccaccgaacgttgcaaagccagcgggctggacgagttcgcagccaacaacctc
atccagtacctcagcgaacaaaaactcgccaccgaggtggttcccagcgacaccaccctg
gtggtggagaggttccatgatgagctgggcgactggcgggtgatcctgcacagccccttc
ggcatgccggtgcacgcaccctgggcactcgccgtggggcagcggctccaccagcggtat
gggctggacggctccgccatggccgccgacgacgggattgtcctccgcgtgcccatgatg
gaggacgagccaccgggagccgagcttttcctgttcgaccccgaggaactggagcagatc
gtcaccgcggaagtgggcggcagtgcgctgttcgcgtcacggttccgggagtgcgccgcc
cgcgccctgctgctgccgcgccagacacccggcaagcggcagccgctgtggcagcaacgg
cagcgttcggcgcagctgctggacgtcgcacggaagtaccctacgtttcccatcgtgctc
gaaacggtccgcgagtgcctgcaggatgtctacgacctccctgcgctaaaagacatcgca
gcgtccgtggaacggcgcgaattgaggatcgtgcagaccactacgtcccagccgtccccg
ttcgccaagtccctcctgttcgggtacgtggcgcagttcctgtacgagggcgattccccg
ctggcggagcgccgggctgccgcgcttgccctggattccaccctcctcaacgagctgctg
gggcgcgttgaactgcgtgaactgctggacgccaaggtcatcgaagccaccgagcgcgaa
ctgcagcgcctggcgccggaccggcgggtgcgtggagtggagggggtcgccgacctgctc
cggctcctgggccccttggcaccggaggaggtggcggaacggctcgaaccagccgcggcg
cctgaaccgggaccggtggttgagcctgtggaaaccgagcccgtgcacgaaacgcacgcc
gaacctgcccaagccgaagcccacctcgtcgcactgcagcgcgccaaccgcgccatcaag
gtcaacatcggcggggccgaacggtttgcggctgttgaggacgccgcgcggctccgcgac
gccatcggcgtacccttgcccatgggcgtcccgctcgccttcatcgaacccgtggcggac
cccttggacgacctggtttcgcgctacgcaaggacccatgggcccttcactgccgccgaa
gcagcagcgcggcttggcctgggcgtggcggtggtgggcacggccctcaagcggctggcg
gcggacgggcgcgtggtggagggcgagttccgtccgcatccggcgcctccggaaaccgga
agcagcgccgaagacggtacccagccggcggcggcagagccgccggccaacctgccccag
cacgcgctggccagcgaatggtgcgacgccgaagtcctgcgcaagctccgccgtcgttcg
cttgcagccctgcgggccgaagtggagcccgtcgacgcggccgcctatggccggttcctg
ccggcctggcagcatgtcaggactcctggcggcgggcgcgggcagccctccctgcgcggg
ctcgacggcatcatcactgccgtggaccagctctccggtgtccctattccggcgtcggcc
tgggagccgttggtcctggccggacgggtttcgaactaccagccggccatgctggacgaa
ctcatggccgccggagaggtgctctggtccggtgccggagccctgcccgggaatgacggc
tggatcagcctgcaccttgccgattccgcggagctgaccctgaaccccgccatcgactat
gaacccggggatgcccaggagcggctgctggaccatttgcggaccaacggcggcggctac
ttcttccggcagctcaccgaggtggccggcggcatggactcggtcctcagcgaccaggaa
gtggtcaccgccctgtgggacctggcctgggcgggccggatcaccggcgatacttttgcg
ccggtccgtgcgctgatcgccggcggacacacggcacaccggcaggtggcgagggccccg
cgggcgagggctccgcggttgagcaggctgggccgttcccacgggaccgggctcatggga
tcgccggggctggcgggcggccgatacggcgcatcgggaggtgctgcggccactcccccg
atggccgccggccgctggtccgccttgccccagccggaactggaccccaccattcatgcc
cgcgccaccgccgagttgctgctggaccgctatggcgtggtcaccaggggctccgtcatg
gcggaacaaatcctgggcggttttggcctgatgtacaaagtcctcgcccggctggaggag
gcagggcgttgccgccgcggctacttcatcgagcacctgggcgcggcgcagttcgctgtt
ccggccaccgttgaccggctccggtcctactcggaggacgcccagctggccaaaccggaa
cccgttgcccttgccctcgccgccacggacccggccaacccgtacggcgccgccctcccc
tggcccgcactccaggacgacgccggcaccgggcaccgacccggccggaaagcaggtgcc
ctggtggtactggtggacggtgcgctggtcctctacgtggagcggggcggcaagacactg
ctggcattcagcgacgaccaggccgtcctcgcggcagcgggcacggccctggtgggcgtg
gtgacccgcggcgcggtggacaagctcatcatggaaaaggtgaacggccacggaattctt
gacacccccgtggctgcggcgctcagctccgccggcgcctactccaccccgaaaggactg
aggatccgtgcctga

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