Pseudarthrobacter phenanthrenivorans: Asphe3_14110
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Entry
Asphe3_14110 CDS
T01435
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apn03016
]
Asphe3_14110
Enzymes [BR:
apn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Asphe3_14110
Transfer RNA biogenesis [BR:
apn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Asphe3_14110
Prokaryotic type
Asphe3_14110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
DUF2244
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADX72585
UniProt:
F0M7D1
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All DBs
Position
1506750..1507703
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AA seq
317 aa
AA seq
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MLSGLVIVDKPQGWTSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVVGINKATRLLTYI
VGTSKTYTATIRLGQSTVTDDAEGEVTATAGTSGVSEQAIHDGVAALTGNIQQVPSSVSA
IKVNGERAYARVRSGEDVTLAARPVTIHRFEVHAIRRNPETDTVDVEVTVECSSGTYIRA
LARDLGNALGVGGHLTALRRTHVGPYSLEQARTLEQLAEELNVLEMSQAARALMPNRELT
AEETTEISFGRRIAAGAATGSAEAATAEHPAAAFAPDGSLVALLADAGSFAKPVLVFAPG
NGNSTPGSSTPGSVGEG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgctttctggactggtgatagtggacaagccgcagggatggaccagccatgatgtggtt
ggccggatgcggcgcctcgcagggacccggaaagtagggcatgcgggcaccctcgatccc
atggccaccggggtgctggtggtgggcatcaacaaggccacccgcctgctcacctacatc
gtgggaacctccaagacctacaccgccactatccgcttgggccagtcgaccgtaacggac
gacgccgaaggtgaagtcactgccacggccggcacttcaggggtcagtgagcaggcgatc
cacgacggcgttgcggcgttgaccggcaacatccagcaggtgcccagcagcgtcagcgcc
atcaaggtcaacggtgagcgtgcctatgcgcgcgtccggtcgggtgaggacgttaccctg
gccgcccgtccagtcaccatccaccgcttcgaagtgcacgccatccggcggaatcctgaa
acggacaccgtggatgtggaggtcaccgttgaatgttcctccggcacctacatccgcgcc
ctggcccgggacctgggcaatgcgctgggggttggtgggcaccttaccgcgctgcggagg
acgcacgtgggcccctactccctggaacaggcgcgaacgctcgaacaactggccgaggaa
ctcaatgtcctggaaatgtcccaggccgcccgggcgctgatgcccaaccgcgagctcacc
gccgaggaaaccactgaaatttccttcggccgccgcattgctgccggcgctgccacggga
agcgccgaagctgccactgccgagcacccggcagccgctttcgcgcccgacggaagcctg
gtggccctgctggctgatgccggcagtttcgccaaaccagtgctggtgtttgcccccggc
aacggcaactccaccccaggcagctccaccccaggcagcgtcggggagggctga
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