Pseudarthrobacter phenanthrenivorans: Asphe3_15630
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Entry
Asphe3_15630 CDS
T01435
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn03030
DNA replication
apn03430
Mismatch repair
apn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asphe3_15630
03430 Mismatch repair
Asphe3_15630
03440 Homologous recombination
Asphe3_15630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apn03032
]
Asphe3_15630
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_15630
Enzymes [BR:
apn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Asphe3_15630
DNA replication proteins [BR:
apn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Asphe3_15630
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Asphe3_15630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADX72732
UniProt:
F0M8Z7
LinkDB
All DBs
Position
1669347..1672904
Genome browser
AA seq
1185 aa
AA seq
DB search
MTSSNDSFVHLHTHTEYSMLDGAARLGELFDETERLGMPALATTDHGYLFGAFDFWKKAT
DKGIKPIIGVEAYVTPGTARGDKSRVRWGEEHQRKDDISGGGSYTHMTLLSYNNAGMRNL
FRASSIASLDAVFGKWPRLDRELLNTYSEGLIATTGCPSGEIQTRLRLGQYREALEAAAE
FRDIFGAENYFCELMDHGLDIERRVTGDLLRLAKDLNLPLVATNDLHYTHEHDAKAHEAL
LAIQSGSTLLEPTYDNGGSRFAFSGSGYYLKSPQEMRELFRDHPDACDNTLLIAERCEVS
FNTGANYMPRFPCPPGEDETSWLVKEVAKGLEYRYPGGVPDNVRAQADYELGVITSMGFP
GYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLRHGLIFERFLNPDRVS
MPDFDVDFDDRRRPEVIDYVTRKYGDERVAMIVTYGTIKTKQALKDSSRVLGYPFSMGEQ
LTKALPPAVMAKDIPLADIQNPEAKRYGEAGDFRQLISTDPEAAKVFETALGIEGLKRQW
GVHAAGVIMSSDPIIDVIPIMRRIQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDA
LENIKLNRGIDLDLENLELDDAPSYELLARGDTLGVFQLDGGPMRSLLKLMKPDNFEDIS
AVLALYRPGPMGANAHTDYALRKNGIQPVIPIHPELEEPLSEILGGTYGLIVYQEQVMAV
AQKLAGYSLGQADILRRAMGKKKKSELDKQFAGFSQGMQDNGYSMEAVKTLWDILLPFSD
YAFNKAHSAAYGVISYWTAYLKAHYAPEYMAALLTSVGDDKDKSAIYLNECRRMGITVLP
PDVNESALNFTPVGNDIRFGMGAIRNVGVNVVEAMVAARESEGAFTSFKDYLMKVPAVVC
NKRTIESLIKSGAFDSLGHHRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFEEAESES
SLSIEIPDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGLLSQHAEMSITSVLGEDGPQD
GAIITIAGMITSLSRRIAKASGNAYARAEVEDLGGSMEVMFFGQVYGPIASVLAEDLIVV
VKGRLQKRDDGAITLNCMELSVPDLSEGLNGPLVITMPTHKATEAVVTELGDVLRTHRGN
SEVRLHLQGDTRTEIMGLPVHLRVNPSPSLFGDLKVLLGPACLDA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccagcaacgactcgtttgtccatctccacacccacaccgagtactccatgctg
gacggtgcggcacgactcggcgagctgttcgacgaaaccgagcggctagggatgccggcc
ctcgccaccaccgaccacggctacctgttcggagctttcgatttctggaagaaggccacc
gacaaggggatcaaacccatcatcggcgtcgaagcctacgtgacgccgggcacggcccgc
ggcgacaagagccgggtgcgctggggcgaggaacaccagcgcaaggacgacatctccggc
ggcggttcctacacccacatgaccctgctcagctataacaacgcgggcatgcggaacctc
ttccgggcttcctcgatcgcctccctggatgccgtgttcggcaaatggccccgcctggac
cgggaactgctgaacacctactcagagggcctcattgccaccaccggctgcccttccggc
gagatccagacgcgcctgcggctgggccagtaccgcgaggcgctggaagccgcggccgag
ttccgcgacatttttggtgcggagaactacttctgcgaactgatggaccatgggctggac
atcgaacggcgggtcacaggggacctgctgcggctcgccaaggatctcaaccttccgctc
gttgccaccaacgacctccactacacgcacgagcacgacgccaaggcgcacgaagccctg
ctggccatccagtccggttccaccctgctcgaacccacctacgacaacggcggctcccgc
ttcgcgttctccggcagcggctactacctgaagtccccccaggagatgcgcgagctcttc
cgcgaccaccccgacgcctgcgacaacaccctcctgatcgccgaacgctgcgaagtctcc
ttcaacaccggcgccaactacatgccgcggttcccctgcccgccgggggaggacgaaact
tcctggctggtcaaagaagtagccaagggactggagtaccgctatcccggcggggtgccc
gacaacgtccgggcccaggccgactacgagcttggcgttatcacctccatgggattcccc
ggctacttcctggtggtggctgacttcatcaactgggccaagaacaacggcatccgggta
ggcccgggccgtggttcgggcgctggttccatggtggcgtacgccatgcgcatcacggac
ctggacccgctccgccacggcctgatcttcgagcgcttcctgaacccggaccgcgtgtcc
atgcccgacttcgacgtcgacttcgatgaccgccgccgccctgaagtgatcgactacgtg
acgcgcaagtacggtgacgagcgcgtggccatgatcgtcacctacggcaccatcaagacc
aagcaggcgttgaaggactcatcccgagtcctggggtaccccttcagcatgggcgagcag
ctcaccaaggcgctgccccccgccgtgatggccaaggacatcccgctggccgatatccag
aatcccgaagccaagcggtacggcgaggccggggacttccgccagctgatcagcacggac
ccggaagcggccaaggtgttcgagaccgcactgggcattgaagggctgaagcggcagtgg
ggcgtccacgcggcaggcgtgatcatgtcctcggacccgatcatcgatgtgatccccatc
atgcggcgcatccaggacggccaggtcatcacccagttcgactaccccacgtgtgagggc
ctcggcctgatcaagatggacttcctgggcctgcggaacctgacgatcatttccgacgcc
ctggaaaacatcaagctgaaccgcggcatcgacctggacctcgaaaacctggaactcgac
gatgccccgtcctacgagctcctggcccgcggcgacaccctgggcgtgttccagctcgac
ggcggacccatgcggtccctgctcaagctgatgaagcccgacaacttcgaagacatttcg
gccgtgctcgccttgtaccggcccggccccatgggcgccaacgcgcacacggactacgcg
ctgcggaaaaacggcatccagcccgtcattcccatccaccccgagcttgaggaacccctc
tccgagatcctgggcgggacctacggcctgatcgtgtaccaggagcaggtgatggccgtg
gcccagaagcttgccgggtactcactgggccaggcagacatcctccgccgtgcgatgggc
aagaagaaaaaatccgaactggacaagcagttcgccggcttttcccagggcatgcaggac
aacggttactccatggaggctgtcaaaaccctctgggacatcctgctgccgttctccgac
tacgccttcaacaaggcccactccgccgcctacggtgtcatctcgtactggaccgcctac
ctcaaggcgcactacgcccccgaatacatggcagcgctgctcacctcggtgggtgacgac
aaggacaagtcggcgatttacctgaacgagtgccgccggatgggcatcacggtgctgccg
ccggacgtcaacgaatccgccctgaacttcacgcccgtgggcaacgacatccgcttcggc
atgggcgcaatccgcaacgtgggcgtcaacgtggtggaggccatggtggccgcccgcgaa
agcgaaggggcgttcacgtccttcaaggactacctgatgaaggtcccggccgtggtctgc
aacaaacggaccatcgaatcgctgatcaagtccggcgccttcgactccctgggccaccac
cgccgggccctggccatgatccacgaagaggccatcgattccgtgatcacgctcaagcgg
aacgaagcgatcggacagttcgacctcttcgccggtttcgaggaagccgaatccgagtcc
tccctgagcatcgagatccctgacctgccggaatgggagaagaaggacaagctgtccttc
gaacgggacatgctgggcctttacgtctcggaccatccgctgcagggcctggaagggctg
ctgagccagcacgcggaaatgagcatcacctccgtcctgggcgaggacgggccacaggac
ggtgccatcatcaccatcgccggcatgatcacctcgttgagcaggcgcatcgccaaagcc
agcggcaacgcctacgcccgcgcggaggtggaggacctgggcggttccatggaagtgatg
ttcttcggccaggtctacggcccgatcgcgtcggtgctggcggaggacctgattgtggtg
gtcaagggccggctgcagaagcgcgacgacggcgccatcacgctgaactgcatggaacta
tccgtcccggacctcagcgagggactgaacgggccgctggtgatcaccatgccgacgcac
aaggccaccgaggccgtggttaccgagcttggcgacgtgctccgcacgcaccgcggaaac
tccgaggtgcgcctgcacctccagggggacacgcgcacggaaatcatggggctgccggtg
cacctgcgcgtgaacccaagcccgtccctgtttggtgacctgaaagtcctcctcggcccc
gcctgcctggacgcctga
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