Pseudarthrobacter phenanthrenivorans: Asphe3_15930
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Entry
Asphe3_15930 CDS
T01435
Name
(GenBank) RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
apn
Pseudarthrobacter phenanthrenivorans
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Asphe3_15930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apn03021
]
Asphe3_15930
Transcription machinery [BR:
apn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Asphe3_15930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
RBR
Motif
Other DBs
NCBI-ProteinID:
ADX72762
UniProt:
F0M9P2
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Position
1707552..1708865
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AA seq
437 aa
AA seq
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MTPSSTKKDPAAQDELSAEEKQAATNAKRAATRAANKASAGEAGADGKREPKKRGPKPGA
KAAAEAAGKSAAGDADEVEEVEEDLDDIILEGPDAVEEDAEADPVKGAAGSGKGFVYSDA
DDDDAPVQQVMSAGATADPVKDYLKQIGKVALLNAEQEVDLALRIEAGLFAEEKINADDG
SMDPKYKRELEFIIHDGKRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRA
VEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLG
REPTPEELALELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAV
SFTLLQEQLHSVLDTLSEREAGVVAMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTM
SKLRHPSRSQVLRDYLD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccgtcttccacgaagaaggaccccgccgcccaggacgaactgtccgcagaggag
aagcaggctgcgaccaacgccaagcgggcggccactcgggcagccaacaaggcttctgcc
ggtgaagctggagcggacggcaagcgcgagcccaaaaagcgcggccccaagcccggcgcc
aaggcagctgccgaggccgcggggaagtctgcggccggtgacgccgatgaagtagaggaa
gttgaggaagacctcgacgacatcatccttgaaggaccggatgccgtggaggaggacgcc
gaagccgatcccgtcaagggtgctgccggctcgggcaagggcttcgtctactccgatgcc
gatgacgacgacgcacctgtccagcaggtgatgtccgccggtgctaccgccgaccccgtc
aaggactacctgaagcagatcggaaaggtcgcgctgctcaacgccgagcaggaagtggac
ctcgccctccgcatcgaagccggcctgtttgccgaagagaagatcaacgcagacgacggc
tccatggatccgaagtacaagcgcgagcttgaattcatcatccacgacggcaagcgcgcc
aagaaccacctccttgaggccaacctccgcttggtggtgtccctcgccaagcgctacacc
ggccgcggcatgctgttcctggacctcatccaggaaggcaacctgggcctgatccgcgcg
gtcgagaagttcgattacaccaagggcttcaagttctctacctacgccacctggtggatc
cgccaggcgatcacccgcgccatggctgaccaggcccgcaccatccgtatcccggttcac
atggtggaagtcatcaacaagctggcccgcgtccagcgccagatgctgcaggacctgggc
agggaacccacgcccgaggagctggcgctcgaactggacatgacccctgaaaaggtcgtc
gaagtccagaagtacggccgcgagcccatttccctccacacgccgctgggcgaggacggc
gactccgagttcggtgacctgattgaggactccgaagctgtggttcccgcggacgcggtc
agcttcacgctcctgcaggagcagctgcactcggtcctggacacactgtccgaacgcgaa
gccggcgtggttgccatgcgcttcggcctcacagatggccagccgaagactttagacgaa
atcggcaaggtctacggtgtgacgcgtgagcgcatccggcagatcgaatcgaagaccatg
tccaagctccgccacccctcgcggtcgcaggtgctccgcgactacttggactaa
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