Pseudarthrobacter phenanthrenivorans: Asphe3_16290
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Entry
Asphe3_16290 CDS
T01435
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apn03016
]
Asphe3_16290
Enzymes [BR:
apn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Asphe3_16290
Transfer RNA biogenesis [BR:
apn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Asphe3_16290
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
PIN_10
Motif
Other DBs
NCBI-ProteinID:
ADX72798
UniProt:
F0M9S8
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All DBs
Position
complement(1753184..1754518)
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AA seq
444 aa
AA seq
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MTPNIPENTTAGVPAADTAPHITVEGFDSPIPEIIELASPRDGVPLVIETQSGLERCAAA
IAAGTGPAGVDAERASGFRYGQRAFLVQIRREGAGTWLIDPEPFENLDIINEALRGVEWI
LHAASQDLPCLSELGMWPDKLFDTELAARLAGLPRVGLAAVIEQLLGFGLAKEHSAADWS
TRPLPEPWLRYAALDVEVLTELREELIELLQADGKLEYAEQEFAAILAAGLPPARVDPWR
KTSGLHQIRDRRQLAAVRELWLERDSLAQKRDVAPGRLIPDSALVAAAKAMPSTVPQLLG
TKGFHGRAAQREAPRWLRCIAAARDLEELPPLHLPTNAPPPPRVWADRDPEAAARLATAR
PLLQAKAEALSLPLENLLTPDYLRRVAWRPPAIISEATVASELRALGAREWQVELVAPLI
AGAFLHPQPLPAKEPKPDAAPAGQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaaacattccggaaaacaccacggccggcgtcccggctgctgataccgcaccc
cacatcacggtggaaggcttcgacagccccatccccgaaattatcgaactcgcttcaccc
cgggacggtgttccgctggtcatcgaaacgcagtccggcctggagcgttgcgccgcggcc
attgccgccgggacgggaccggcaggggttgatgcggagcgggcatccgggttccgctac
ggccagcgcgcgttcctggtgcagatccggcgcgagggtgcgggaacctggctgatcgat
cccgaacccttcgaaaacctggacatcattaacgaggccctgcggggtgtggaatggatc
ctgcacgctgccagccaggacctgccctgcctctccgaactcgggatgtggccggacaag
ctctttgacaccgaactggccgcccggcttgcgggactgccgcgggtgggcctcgccgcc
gtcatcgaacaactgctcggtttcgggctggccaaggaacactccgcagccgactggtcc
acccggccgctgcccgagccctggctgcggtacgccgcactggacgtcgaggtcctgacg
gagctgcgggaggaactcatcgaactcctccaggccgacggaaaactggagtacgccgaa
caggaattcgcggcgatcctggccgcgggactgcctccggcccgcgtggatccttggcgc
aagacctcgggcctgcaccagatccgggaccgccggcagctggctgccgtgcgggagctg
tggctggagcgtgactcgctggcccagaaacgggatgtggcgcccgggaggctgattccg
gactccgcactcgtggcggcagccaaggcgatgccctccactgtgccacagctgctggga
accaagggattccatggccgggccgcgcaacgtgaagccccccgctggctccgctgcatc
gccgcagcccgggacctcgaggaactcccgccgctgcacctgcccacgaacgcaccgccc
ccgccccgggtctgggccgaccgggacccagaagccgcggcccgcctggccacggcacgg
cccctgctgcaggccaaggcagaagcgttgagcctgccgctggagaacctgcttactccc
gattacctgcggcgggtggcctggcggccgccggccatcatcagcgaagcaacagtagct
tcggagctccgtgccctgggcgcccgcgagtggcaggtggaactggttgcgccgctcatt
gccggggccttcctccacccgcagccactgcccgccaaggaaccgaaacccgacgccgct
ccggccgggcagtag
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