Pseudarthrobacter phenanthrenivorans: Asphe3_17800
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Entry
Asphe3_17800 CDS
T01435
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn03030
DNA replication
apn03410
Base excision repair
apn03420
Nucleotide excision repair
apn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asphe3_17800
03410 Base excision repair
Asphe3_17800
03420 Nucleotide excision repair
Asphe3_17800
03440 Homologous recombination
Asphe3_17800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apn03032
]
Asphe3_17800
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_17800
Enzymes [BR:
apn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Asphe3_17800
DNA replication proteins [BR:
apn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Asphe3_17800
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Asphe3_17800
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asphe3_17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
ADX72936
UniProt:
F0MB60
LinkDB
All DBs
Position
1911709..1914567
Genome browser
AA seq
952 aa
AA seq
DB search
MSETTKPAPFPSQTLQEDNPAQGSDSLGAAAAGEGAGQGKAPAQAGGSVSATAAPVVPIT
GQPRLLVLDGHSMAFRAFFALPADKFSTANGQHTNAIHGFTSMLINLIKEQQPTHVAVAF
DVSDETTHRKTEYTEYKGGRNETPREMNNQIDLIAQVMEAWGIKTITMPGYEADDILATL
ATMGEKAGFEVLLVTGDRDAFQLINDNVFVLYPKKGVSDIPRLDAAAIEAKYFVPPSRYS
DLAALVGETADNLPGVPGVGPKTAAKWINLYGGLDGVLEHLDSIGGKVGDALRENVEAVK
RNRRLNELHTDLALPVTLDDLYQPRPNQAALEDLFDKLEFKTIRSRLFALYGDEDSPAAE
RESIETPEYTVPAGAEELQAFLAGGAGQRSALAVDLIPGRIGEDAAALAIVRDGAAAYID
LAGQDAESENVLAGWLRDPESPKVLHGFKAALKALTSRGLELEGVVDDTSISGYLIQPDR
RTYELAELAQHHLNVGIPQATAKAGQLELSFDGEDEAAADALVQSAAVVQALSRYFEGEL
KERRAEELLSTLELPVSRVLADMELAGIGIDMARMDDQLADLARVIDQAQEQAFAAIGHE
VNLGSPKQLQTVLFEELQLPKTKKIKSGYTTDAASLKNLLEKTGHEFLVQLMAHREAAKL
RQMLESLKKSVAEDGRIHTTYAQNVAATGRISSNNPNLQNIPIRSEEGRRVRGIFVVGEG
YECLLSADYSQIEMRIMAHLSGDQGLIQAYKDGEDLHRFVGSNIFHVPAEEVTSAMRSKV
KAMSYGLAYGLTSFGLSKQLEISVDEARTLMKEYFDRFGAVRDYLRGVVDQARVDGYTAT
IEGRRRYLPDLTSTDRQLRENAERIALNSPIQGSAADIIKRAMLGVHAELKAQGLASRML
LQVHDELVLEVAPGERGAVEKLVTDQMAAAADLSVPLEVQIGVGPSWYDAGH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaaacaaccaaaccggcccctttcccgtcccaaaccctgcaggaagacaatcca
gcccagggttccgactcccttggggctgctgcagccggggaaggcgcgggccagggcaag
gctccggcccaggcgggcggatcagtttcagctaccgccgctccggtggttcccatcaca
gggcagccccggctgctggtcctggacggccactccatggccttccgcgcgttttttgcg
ttgcctgcggacaagttctccaccgccaacgggcagcacaccaacgccattcacggattc
acgtccatgctgatcaacctcatcaaggagcagcagcccacccacgttgccgtggcattc
gacgtctcggacgaaaccacccaccgcaaaaccgagtacaccgagtacaaggggggacgg
aacgagaccccccgggagatgaacaaccagatcgacctgattgcgcaggtgatggaagcc
tggggcatcaagaccatcaccatgcccgggtacgaggccgacgacatcctggccaccctg
gcaaccatgggcgaaaaggccggtttcgaagtcctgctggtgacgggagaccgcgacgcc
ttccagctcatcaatgacaacgtcttcgtgctgtacccgaagaagggcgtcagcgacatc
ccgcggttggacgccgccgccatcgaagcgaagtacttcgtgccgccgtcccggtactct
gacctcgccgcgctggtgggggagacggcggacaacctccccggagtcccgggcgtggga
cccaagacagccgcaaagtggatcaacctttacggcggactggatggagtcctggaacac
ctggactccatcggggggaaagtcggcgacgcgctgcgggaaaacgtcgaagccgtcaag
cggaaccggcggctcaatgagcttcacactgacctggcactccccgtcacgctcgatgac
ctgtaccagccccggcccaaccaggcggcgctggaagacctcttcgacaagctcgagttc
aagaccatccgcagccggctgttcgcgctctacggtgacgaggacagccccgccgcggag
cgcgagagcatcgaaaccccggagtacaccgttccggccggggccgaagagctccaggcg
ttcctcgccggcggcgcggggcagcggtcagccctggccgtggacctcattcccgggcgg
atcggcgaggacgccgccgccctggccattgtccgggacggtgccgccgcctacatcgac
cttgccggccaggacgccgagtcggaaaacgtcctggccggatggcttcgtgaccccgag
tcacccaaggtcctgcatggcttcaaggccgcgctcaaggcgctgacctcgcgggggctg
gaactggaaggggtggttgacgacacctccatctcgggctatctcatccagccggaccgc
cgcacctatgaactcgccgagctcgcccagcaccacctgaacgtcgggatcccgcaggcc
accgccaaggcgggccagctggaactgtccttcgacggggaggacgaagccgccgccgac
gcactcgtccagtcggccgccgtcgtgcaggccctcagccgctacttcgaaggcgaactg
aaggagcgccgggccgaggaactcctgtccacgctggaactgccggtcagccgggtcctg
gcggacatggaactcgccggcatcggcatcgacatggcgcgcatggacgatcagctcgcc
gacctggcccgggtaattgaccaggcacaggagcaggcgttcgcggcgatcggccacgag
gtcaatctgggctcgccaaaacagctccagactgtcctgttcgaggaactacagctgccc
aagaccaagaagatcaagtccgggtacaccacggacgcggcatccctcaagaacctcctg
gagaaaaccggccatgagttcctggtccagctcatggcgcaccgtgaggccgccaagctg
cgccaaatgctggaatcgctgaagaagtccgtggcggaggacggccgcattcacaccacc
tatgcacagaacgtggcggccacgggccggatctcctcaaacaatcccaacctgcagaac
atccccatccgcagcgaggaaggtcgcagggtccgcggaatcttcgtggtgggggaaggc
tacgagtgcctgctgtccgccgactactcgcagatcgaaatgcggatcatggcgcacctc
tccggggaccagggcctgatccaggcgtacaaggacggcgaggacctgcaccggttcgtg
ggatccaatatcttccacgtgcccgccgaggaagtcaccagcgccatgcgctccaaggtg
aaagccatgtcctatggactcgcttacggcctgacgtcgttcggcctgtccaagcagctg
gaaatttccgtggacgaggcccgcacgctcatgaaggagtacttcgaccgcttcggcgcg
gtccgtgactacctccgcggcgtggtggaccaggcccgcgtggacggctacaccgcaacc
attgagggacgccgccggtacctgccggacctgaccagcacagaccggcagctccgggaa
aacgcagagcgcatcgccctcaacagccccatccagggttcagctgcggacatcatcaag
cgtgccatgctgggtgtccacgccgagctgaaggcgcaagggctcgcatcacggatgctg
ctccaggtccatgacgaactcgtcctggaggtcgcgcccggggaacgcggcgccgtggag
aaactggtgactgaccagatggcggccgcagcggacctcagcgtcccgctcgaagtccag
atcggcgtcgggcccagctggtacgacgccggccactag
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