Pseudarthrobacter phenanthrenivorans: Asphe3_22840
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Entry
Asphe3_22840 CDS
T01435
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Asphe3_22840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_22840
Enzymes [BR:
apn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Asphe3_22840
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Asphe3_22840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ADX73423
UniProt:
F0M4D3
LinkDB
All DBs
Position
complement(2429415..2430383)
Genome browser
AA seq
322 aa
AA seq
DB search
MPEGHSVRRLARQFGDVFGGRRLSVSSPQGRFSAGAALLDGHRMTAADAHGKHLFLHFDN
ALVLHVHLGLYGAWSFGGDSTFTGSSSIGAPRRIGEQETFAAAADDDADGGGDAGYAGPP
APVGAVRVRLAASNGWADLRGATTCETITAAEADAVLARLGPDPLRNLRGDAGRFAANLQ
GRKAPLAALLMDQKIIAGVGNVYRAEVLFRRRLDPWLPGSDVPEPAARRLWRDVVSVMND
GVSDGRIITTPPKYWSDHGKAAGRAGAARAAALPKSETYPARDNAHFVYKRDGLPCRVCR
TTVLMSELVGRKLYWCPSCQQS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaagggcattccgtccgccggctggcacggcagttcggggacgtgttcggcgga
cggcggctcagtgtgtccagcccgcagggacggttcagtgcgggcgccgccctcctggac
gggcacagaatgacggccgccgacgcacacggaaaacaccttttcctgcacttcgacaac
gccctggtgctgcacgtccacctgggcctctacggcgcctggagcttcggcggcgacagc
acctttaccggctcctcgagcattggtgcgccgcggcggataggggagcaggagactttc
gcagcggcggccgacgacgacgcggacggcgggggtgatgccggctacgcgggtccgccc
gcacccgtgggggctgtgcgggtcaggcttgccgccagcaacggctgggctgacctgcgg
ggcgcaaccacctgcgaaaccatcaccgctgccgaagctgacgccgtccttgcccggctg
ggtccggacccgctccggaacctgcggggcgacgccgggcgcttcgccgcaaacctgcag
ggccgcaaggctccgctggcggcgctcctgatggaccagaagatcatcgccggtgtgggc
aacgtctaccgcgccgaggtcctgttccggcgccgcctggacccctggttgccgggcagt
gacgttcctgagcccgcggcacgcaggctgtggcgcgacgtcgtgtccgtcatgaacgac
ggcgtgtccgacggccggatcattacgacgccgcccaagtattggtcggatcacggcaaa
gcagcgggccgggcgggggctgcacgggctgcggcgctgcccaagtcggaaacctaccca
gccagggacaacgcgcactttgtgtataaacgggacgggctgccctgccgggtttgccgc
accacggtattgatgtcagaactggtggggcgcaaactttactggtgcccgtcctgccag
cagtcttaa
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