Pseudarthrobacter phenanthrenivorans: Asphe3_24350
Help
Entry
Asphe3_24350 CDS
T01435
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
apn
Pseudarthrobacter phenanthrenivorans
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_24350
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Asphe3_24350
Archaeal homologous recombinant proteins
Asphe3_24350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
AAA_21
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADX73565
UniProt:
F0M5X0
LinkDB
All DBs
Position
complement(2586466..2589537)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRIHRLIISGFGPFAGTEEIDFDRLSAHGLFLLNGPTGAGKTSVLDAICFALYGSVPGAR
QDGKRLRSDHAEPAQEPAVTCEFSAQGRRYEVTRSPAWDKPSARGKNGFTTQQAKTLLRE
RVDGTWTEKSARNDEAGAEILALLGMDREQFTRVVMLPQGDFAAFLRSKATDRLELLQKL
FGTERFEAVELELSRQAQAAKEEVSVLAGQLELLAVRAEAEADPLELDGAGAPPVEDTAA
RLTWLENAVGLRRQELAGRAEEAEAGSNGCRNAVEAEAAREDRRRKLDSAEARKAAAEQA
APLLEGQLLRLSRHRKAEVLDAQLRALDSADAKVRSAANAAESAVTLLRLAAGEDAELSR
LDLDFSADFAAAGTAQPVAGADAELGRLRSLLAVVEARLPDEDRLLALRKRHSVLAKKRE
ELAAVLARDGSRTEELQAERTRISGGLQELEQRSAAVALRRKEAAAAQELLDVVKRYASA
VSARNLVKVRHDESREQQLEAKRRWLDLREQRLANAAAELAAGLVQGEQCPVCGSHDHPD
PAAGGHGGPALAQEEEDARLVHEAAEAAFNRVAAEWGNASQLVAVLAGQGGDTPEAAALD
AAESAGRAAADAEAAEAELRLSRLRLDELAAALAAVQEARTGTEGELARTAASLEDVSEQ
AAALDVSLAELRGGHRSLPKRLRALEDAVAVLAKAVEAHGHLGRMQAQHAEAREELELAL
PAAGFSTAVEAREQLLDGAAAEALESGIRAAQDEEAKVAELFVSADILQALEEKTAGYEP
DGERLGALREVAAAAAREARDADLAAGMAARCLASLQSIRAEYDELAGSAQQPAERARML
AGLADAAAGRGENAYRMSLNSYVLAARLEQVALAASERLVAMSDGRYLLQHTDARAARGA
KSGLGLEVVDQWTGFRRDTSTLSGGESFMASLSLALGLADVVQQEAGGVEIETLFVDEGF
GSLDEQSLEQVMDALEGLRDGGRVVGLVSHVAEMKQRIGAQLQVMKGRNGSTLRISDSLD
APA
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaggatccaccggcttatcatctccgggttcggtccctttgccggcacggaggaaatc
gacttcgacaggctcagcgcgcacgggctcttcctcctcaacggccccacgggcgcaggg
aaaaccagcgtgctggatgccatctgcttcgccctgtacggctcggtgcccggcgcccgc
caggacgggaagcggctccgcagtgaccacgcggaacccgcgcaggaacctgcagtcacc
tgcgaattctctgcccagggccgcaggtatgaagtgacgcgttcaccggcgtgggacaag
ccgagcgcccgcgggaagaacggcttcaccacccagcaggccaagacgctgctccgggaa
cgcgtggacggcacgtggaccgagaagtccgcccgcaacgatgaggccggtgctgagatc
ctggcgctgctgggaatggaccgggaacagttcacccgcgtcgtcatgctgccgcagggt
gacttcgcagccttcctgcggtccaaagccaccgaccggctggaactcctgcagaagctt
tttgggaccgaacggttcgaagcggttgaactggaactctcgcgccaggcccaggccgcc
aaggaggaagtctcggtcctggcgggccagcttgaactcctggctgtccgggcggaagcc
gaagcggaccccctggaacttgacggggcaggcgctcctcccgtggaggatacggccgcg
cgcctcacctggctcgaaaacgctgtgggactgcgccgccaggaattggcggggcgcgcg
gaggaagctgaagccggaagcaacggatgccggaacgccgtggaagctgaggcggcgcgt
gaagaccggcgccgcaaactggattccgccgaggcccgcaaagcggcggcggagcaggct
gcaccgctgcttgagggccagctccttcggctttcccggcaccggaaggcagaggtgctg
gacgcgcagttgcgggctctcgactccgcagatgcgaaggtacgcagtgcggccaacgcg
gcggagtcggcagtcacgctgctgcgccttgctgccggagaagacgccgagctgtcccgg
ctggaccttgatttctccgccgatttcgccgccgcgggcacagcacaaccggtggcgggt
gccgatgccgaactcggccgcctgcgctccctcctcgccgtggtggaggccaggctgccg
gacgaggaccggctgctggccctccggaagcgacacagcgtcttggcgaaaaagcgggag
gagctcgccgctgtcctggcccgcgacggaagccgtacggaagaactccaagcggaacgg
acccgcatcagcggcgggctgcaggaactggagcagcgctcggccgcagtcgccctgcgg
cggaaggaggcagcggcggcacaggaattgctggacgtggtcaagcgctacgcttccgca
gtgtccgcacgcaacctggtgaaggtccgccatgatgaatcccgggagcagcagctggag
gccaagcgccgctggctggacctaagggaacaacggcttgccaatgctgctgcggaactg
gcggctggacttgtgcagggggagcaatgccctgtctgcggcagccatgaccaccctgat
cccgcagcgggtggacacggcggtcccgctcttgcccaggaagaggaagacgcgcggctg
gtccacgaggcggcggaagccgctttcaaccgggtggctgcagaatgggggaacgccagc
caactggtggctgtccttgccgggcagggcggggacacgcccgaggccgccgccctggac
gccgcggaaagtgcaggccgggcagcggcagacgcggaagccgccgaggctgagctgcgc
ttgtcgcggctgcggcttgacgagcttgctgctgcgctggcggctgtgcaggaagcacgg
accggaaccgaaggcgagctggcccggacggcggcatccctggaggacgtgtccgaacag
gcggctgccctggacgtttccttggccgagctgaggggaggccaccggagcctgcccaag
cggttacgggcgctggaggacgcagtggcggttctggctaaggctgtggaggcgcacggg
catcttggcaggatgcaggcccagcatgccgaggcgcgggaagaactggaactggcactg
cccgcggcaggtttctccaccgccgtcgaggcgcgggagcagctgctcgacggtgccgcg
gcggaggcgcttgagtcaggaatacgtgcggctcaggatgaggaagccaaggtggcagag
cttttcgtgtccgcggacatcctgcaggcccttgaggaaaaaaccgccggttacgaaccc
gacggggaacggcttggcgcccttcgggaggttgcggctgcggccgcacgggaggcccgg
gacgcggatttggctgccggcatggccgcccgctgcctcgcctcgctgcaaagcatccgt
gcggaatacgacgaactcgcgggatctgcgcagcagccggcggagcgggcacggatgctg
gccgggctggcagacgccgctgcgggccgcggtgagaacgcctaccggatgagcctcaac
agctacgtactggccgcccgcctggagcaggttgcgctcgcagcttcggagcggctggtg
gccatgagcgatggccgctatctcctccagcacacggacgccagggccgcgcgcggggca
aagtcagggcttggcctggaagtggtggaccagtggacggggttccgccgggacacctcc
acgctgtccggaggggaatccttcatggcatccctgtccctggccctggggctggcggat
gtggtgcagcaggaggcagggggagtggagatcgaaacgctcttcgtggacgaaggattc
gggagcctggacgagcagtccctggaacaggtcatggatgcccttgaaggcctgcgggac
ggcgggcgcgtggtaggacttgtcagccatgtggcagagatgaagcagcgtatcggcgcc
cagctccaggtgatgaaggggcggaacggctcgacgctgcggatatcggactccctggat
gcgcccgcctga
DBGET
integrated database retrieval system
