Pseudarthrobacter phenanthrenivorans: Asphe3_24360
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Entry
Asphe3_24360 CDS
T01435
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
apn
Pseudarthrobacter phenanthrenivorans
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_24360
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Asphe3_24360
Archaeal homologous recombinant proteins
Asphe3_24360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Chlorosome_CsmC
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADX73566
UniProt:
F0M5X1
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All DBs
Position
complement(2589534..2590709)
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AA seq
391 aa
AA seq
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MRLLHTSDWHLGRSFHGVGMLEAQRNFVSQLVDAVTRYGVDVVLVAGDVYDRALPGVDVV
RLLDEALVRITSAGAKVVLTSGNHDSAIRLGFASRLLERGGVHLRTRVQDLAEPLLLPLA
DGRASGAVLAIYGIPWLEPRLVADQLGVDTASHFEVTRAATGMIRADLERRSASSTVHSV
VLAHTFASGGISSDSERDLSIGGVGAVPLDLFDGFGYTALGHLHGRQVLSPQVRYSGSPL
AYSFSEAAHQKGGWLVDVGVEGVTSVQEVLWEAPRKLAVLRGPLAELLESADHQWAESAY
CQVTLTDNQRPARAMERLRSRFPDTLVLGFEPAGGTAAAAASYSSRLAAAPDDLSVCCGF
LDHVRGRIPDEAEKAALAAALDNVRLQEASR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcggttactccacacctcggactggcacttgggccggtccttccacggcgttggcatg
cttgaggcccagcgcaattttgtctcccagctggtggacgcggtcacccggtacggcgtt
gacgttgtcctcgtagcgggggacgtctatgaccgtgcgctcccgggcgtggacgtggtc
cgcctgctggatgaggcactcgtgcgcatcacctcggccggagctaaagtcgtgctcacc
agcggcaaccatgattccgccatccgccttggattcgcctcccggctactggaacgcggg
ggagtccaccttcggaccagggtccaggacctggccgagccgttgctgctgccgctggct
gacggccgtgccagcggggctgtgctggccatttacggcatcccatggcttgagccgcgg
ctcgtcgccgatcagctgggcgtggacaccgccagccacttcgaggtcacacgcgccgca
accgggatgatccgggcggacctggagcggcggtcggcgtcctcgaccgtgcactccgta
gtcctggcccacacctttgccagcgggggcatcagctcggacagtgaacgggatctcagc
atcggcggtgtgggtgcggtgccgctggacctctttgacggcttcggctacacggccctg
ggccatctgcacgggcggcaggtgctctcgccgcaggtaaggtattcgggctcgcccctg
gcctattccttctccgaagccgcccaccagaagggcggctggctcgtggatgtcggtgtg
gagggggtcacctcggtgcaggaagtgttgtgggaggcgccgcggaagctggccgtgctc
cgcgggcccctggcagagctccttgagtctgccgaccaccagtgggcggaatccgcgtac
tgccaggtcaccctcacggacaaccagcggccggccagggcaatggagaggctccgttcc
cggttccccgacaccctggtcctcgggttcgagcccgccggcgggaccgctgctgccgct
gcaagctacagcagcaggctcgcggccgcgccggacgacctttccgtgtgctgcggcttc
ctggaccatgtgcgcggccggatccctgatgaagccgagaaagcggcgctcgccgccgcc
cttgacaacgttcgccttcaggaggcgtcacgatga
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