Pseudarthrobacter phenanthrenivorans: Asphe3_24400
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Entry
Asphe3_24400 CDS
T01435
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn03030
DNA replication
apn03430
Mismatch repair
apn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asphe3_24400
03430 Mismatch repair
Asphe3_24400
03440 Homologous recombination
Asphe3_24400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apn03032
]
Asphe3_24400
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_24400
Enzymes [BR:
apn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Asphe3_24400
DNA replication proteins [BR:
apn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Asphe3_24400
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Asphe3_24400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
ADX73570
UniProt:
F0M5X5
LinkDB
All DBs
Position
complement(2593555..2594559)
Genome browser
AA seq
334 aa
AA seq
DB search
MDFTAIDFETANGFRGSPCAVGLTKVRGGRIAEEASWLMQPPLNHDHFDYHNVRIHGIRP
EHVAGKPRFGELFPEIGAFIGDDILAAHNAAFDLGVIRSGLEVSGLPGPAYDYVCTVMLS
RRCYSLVSNSLPFAAEEAGVPLVNHHDAAEDARACAGILIDIARRNRANSIAELYLSLGL
AVPRQHAFDPASGVLSKPSLAALSTMAGGTAAPARAFQPGWPEEGANPLPNPDAEPGHPL
YGQTVVFTGQLAMGRPEAKKRSADVGARPESRVTGRTTVLVVGDGFVASDLRSGRLTGKA
RRVLELHERGQAIEVLSEGEFLQMVAGYAAAAIA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttggactttacggcgatcgactttgagactgcgaacggcttccggggctcgccctgtgcg
gttggcctgacgaaggtccggggcggacggatcgcggaggaagcctcctggctgatgcag
cccccactgaaccacgaccacttcgactaccacaatgtccggatccacggcatccgtcct
gagcacgtggccggaaagccgcgtttcggggagctctttccggagatcggcgcgtttatc
ggcgatgacatcctcgccgcgcacaatgccgccttcgacttgggcgtgatccgttcggga
ctggaagtctcggggctgcccgggcccgcctacgactacgtctgcaccgtgatgctgtcc
cgcaggtgctattccctggtctccaactcgcttccgttcgcggccgaggaagccggtgtt
ccgctggtcaaccatcacgacgccgccgaggacgcccgggcctgtgcagggatcctgatc
gacatcgccaggcggaaccgggccaacagcatcgccgaactctatctgtccctgggcctc
gcggtcccgcggcagcatgccttcgatcctgccagcggcgtcctgtccaaacccagcctc
gcagcgctgtccaccatggccggcggcaccgcggctccggccagggccttccagccgggc
tggccggaggaaggcgccaacccccttcccaaccctgacgcagagccgggccatcccttg
tacgggcagaccgtcgtcttcaccggccagctggccatggggcggccggaagcgaaaaag
cgttcagccgacgtcggtgcccggccggagagccgggtgaccggacgcacaacggtcctg
gtggtgggtgatggttttgtggcgtccgatctccgctccggcaggctgaccggcaaggcg
cggcgcgtcctggaactccatgagcgcgggcaggccatcgaagtactgtccgaaggcgag
ttcctgcagatggtggccggttacgcagccgcagcaatcgcctga
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