Pseudarthrobacter phenanthrenivorans: Asphe3_26180
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Entry
Asphe3_26180 CDS
T01435
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn03420
Nucleotide excision repair
apn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Asphe3_26180
03430 Mismatch repair
Asphe3_26180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_26180
Enzymes [BR:
apn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asphe3_26180
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asphe3_26180
MMR (mismatch excision repair)
Other MMR factors
Asphe3_26180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADX73740
UniProt:
F0M877
LinkDB
All DBs
Position
complement(2793892..2797497)
Genome browser
AA seq
1201 aa
AA seq
DB search
MRQELHAPAAAPGEVRPSARPAGSAVVLPEPRFSPEDLSGLLGEKNVPTPEQSAIISSPL
APRLVIAGAGSGKTATMADRVVWLVANGWVKPEEVLGVTFTRKAAGELASRIRAKLAALQ
RLAGQDTVSQDQENRLFPDGLPGSDALEPKVSTYHSFASGIVSDYGLRLGVERDVVLLGG
AQAWQLASEVVEAYDGEYGHFRAAKSTLVKAVIQLAGECAEHLQEPEDVEAWLMARLSDF
EALPYLADKKKNPPQAAAELAGMLRTRASVADMVGRYASAKRSRGALDFGDLVALAARVA
QEVPLAAQMERQRYKVVLLDEFQDTSHAQLVLFSRLFGGGHAVTAVGDPNQSIYGFRGAS
AGQLFHFVREFPVWNGSAGKSDPSQGPEVDSGSWSPAPTSYLTTAWRNGRSILAAANVMS
EALGRAAAQRGPAGGGGPAAPEVPPLQPSPHAAAGSVVLGRFGSDVDEAGAIAEDVLKYR
MTDFELKPDGSRVPPAIAVLCRRRAQMEPIRRQLEARGIAYEIVGLGGLLDTPEIVDLVA
TLRVLADPGRSDALMRLLAGARWRIGPADLMALRDWSSQLARRRGVSGPAGGHLTEDGPT
VLEGDLTDGASLVEALDWLPREGWISANGRSLTPAARERMLRLSAELRQLRGYLGDDLTT
LLGEVERAMLLDIEVAARPGISIHQARRNLDAFQDAAAGFLRTSQRVDILAFLSWLEAAA
AEENGLEAPPSEVSREAVQLLTVHASKGLEWDVVFVPGLNAKDFPSDRDSRWSSGSAALP
WPLRGDRADLPQWDLDQPDQKGWLDAEKDFKADALAHGELEERRLAYVAYTRAKYVLWAS
SAAWVGSRSGRAEMSPFLAELEVLAGPLQGEAPRATIHPRSVEEASLPETSPLTLDAEVA
GWPYDPLEGPVDPRTGERLRLAAGRRNAMETASARVLAALAAPQHGEARDLRGVGPAGGT
QPGARNVPAPDAGLPGVSSGWAREAALLLERRARRSSAQDVHLPTHISASTLVELDEDPS
AVLWRLRRPVPREPGMSARKGTAFHAWVEEYFGTAGMLDLGDAPGSDDHIDAAYDLDAMV
ATFKASPWAHRSPAFIEVPVETRVGDVVVRGRIDAVFQDADGRWDLVDWKTGRRPSGERL
RTRAVQLAAYRLAWSRLKGVPLEDVRAAFFYVADNEVVRPHDLGSAAQLEGIVAAAFTAP
A
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaggagctgcatgcccctgcagctgctccgggggaggtccgccccagcgcacgg
ccggccgggtccgctgttgtccttccggaaccacgcttcagcccggaggacctttccggg
ctgctcggcgagaagaatgtgcctaccccggagcagtccgccattatttcgtccccactg
gcgccgcggctggtgatcgcgggtgcaggttcgggcaagacagcaaccatggcggaccgc
gtggtgtggctcgtggccaacggctgggtcaagcctgaggaagtcctgggtgtgacgttc
acccgcaaagcggctggtgaacttgcgtccagaattcgggcgaagctggcggccctgcag
cggctggccggccaggacaccgtttcccaggaccaggaaaaccggttgttccctgacggg
ctgcccggcagcgatgcgctggagccgaaggtgtcaacgtaccactcgttcgccagcggc
atcgtgtccgactatggactccgcctgggcgttgagcgggatgtggtcctgctgggcggc
gcgcaggcctggcagctggccagcgaagtcgtagaggcgtacgacggcgagtatggccac
ttccgggccgccaagtccacgctggtcaaggcagtcatccagctggccggcgaatgcgcc
gagcacctgcaggaacctgaggatgtggaagcgtggctgatggcgcggctgtcggacttc
gaggcgcttccctacctggcggacaagaagaaaaacccgccacaggcagccgctgagctc
gcggggatgttgaggacacgggccagcgtagcggacatggttggccggtatgcctcggcc
aagcgctcccggggggcccttgacttcggcgatcttgttgccctcgcggcccgcgtggcg
caggaagtcccgttggccgcccagatggaacggcagcgctataaagtggtcctcctggac
gaattccaggacacgtcccacgcccagctggtcctcttctcgcggctcttcggcggcgga
cacgcagtcacggcggtgggggatcccaaccagtccatctacggtttccgcggcgcatcc
gccggccagctcttccatttcgtgagggagtttcctgtgtggaacgggtccgcgggcaaa
agcgacccgtcgcaggggccggaagtcgactccggcagctggagtcccgcacctacgtcc
tacctcaccacggcgtggcggaacggccggtccattttggccgctgccaacgtcatgtct
gaggccctgggccgggccgctgcgcagcgcggtcccgccggcgggggaggacctgcagcc
ccggaggtgccgccgctgcaaccgagcccccatgcggcggcgggatcggtggtgcttggc
cggttcggaagcgacgtggatgaggccggagccatcgccgaggacgtcctcaaataccgc
atgacggatttcgaactgaaaccggatggttcacgtgttccgcctgcgatcgccgtcctc
tgccgccgccgggcgcagatggaacccatccgccggcaattggaagcgcggggcattgcc
tacgagatcgtcgggcttggcgggctccttgacaccccggaaatagtggatctggtggcc
accctccgcgtcctggcggatccgggccgttccgatgcgctgatgcgacttcttgcgggc
gcgcgctggcggataggtccggcggacctgatggccctccgtgactggtccagtcagctt
gcccggcgccggggcgtttccgggccggccggcggccacctcaccgaggatgggccaacc
gtcctcgaaggtgacttaacggacggtgccagcctcgtggaagcactggactggctgccc
cgggaaggctggatctcagccaatggcaggtcccttacccccgccgcccgggaacggatg
ctccggttatccgccgaactgcggcagctccgcggctacctgggtgacgacctcaccact
ttgctcggggaagtggaaagggccatgctgctggacattgaagtggccgccaggcccggg
atcagcatccaccaggcacgccgcaaccttgatgccttccaggatgcggcggccggtttc
ctgaggacctcccagcgcgtggatatcctcgctttcctgtcatggctggaggcagcggca
gccgaagaaaacggactggaggcgccgccaagcgaggtcagccgggaggccgtgcagctt
ctcacggtccatgcctccaaggggcttgaatgggatgttgtttttgttcccgggcttaac
gccaaggactttcccagtgaccgtgactcgcgctggagcagcgggtcggcagccttgccc
tggcccctgcggggggaccgggccgacctgccgcagtgggacctcgaccagcccgaccaa
aagggctggctggatgcggaaaaggattttaaggccgatgcccttgcgcatggggagctg
gaggaacgccggctcgcttacgtggcctacacacgcgcgaagtacgtcctgtgggcgtcc
agcgccgcctgggtgggatcgcggtcagggcgggctgaaatgtcccctttcctggcggag
cttgaggtcctggccggcccactccaaggcgaggcaccccgggcgaccatccacccacgt
tcggtggaggaggcttcgctgccggagacgagtccgctgacgcttgacgccgaggtagcc
ggctggccgtatgatccgctggaagggccagtggacccgcgcaccggggagcgcctgcgg
ctggcggccgggcgcaggaatgccatggaaactgcatcagcccgtgtcctggccgccctg
gccgcgccacagcacggagaggcccgtgaccttcggggcgtcgggccagccggagggaca
cagcctggagcacgcaatgttccagccccggacgccgggctccccggggtgtcttcaggg
tgggcgcgcgaggcagcactgctgctcgagcgccgggcacggaggtcatcggcccaggat
gtgcaccttcccacccacatttccgcctccacccttgtggagttggacgaagacccgtcg
gcagtgctttggcggctccgcaggccggtgccgcgggagcccggcatgtccgcaaggaag
gggacggcgttccatgcctgggtggaggaatatttcggtacggccggcatgctggacctc
ggcgacgcacctggctcagatgaccacattgatgcagcgtacgacctcgacgccatggtg
gccaccttcaaggcgtccccttgggcccaccgctcgcccgccttcattgaggtgccagtg
gaaacccgtgtaggggatgtggtggtccggggccggatcgatgccgtcttccaggacgct
gacggccgttgggacctggtggactggaagaccggcaggcggccctccggtgaacggctt
cgaacccgggcagtccagcttgcggcctaccggctggcctggtcgcggctgaaaggggtg
cccctggaagacgtgcgggcagcgttcttctatgtggcggacaacgaggtggtgcggccc
cacgacctcgggtccgctgcccagttggaggggattgtggctgcggccttcaccgccccg
gcctag
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