Pseudarthrobacter phenanthrenivorans: Asphe3_27280
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Entry
Asphe3_27280 CDS
T01435
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Asphe3_27280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apn03019
]
Asphe3_27280
03110 Chaperones and folding catalysts [BR:
apn03110
]
Asphe3_27280
03029 Mitochondrial biogenesis [BR:
apn03029
]
Asphe3_27280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apn04147
]
Asphe3_27280
Enzymes [BR:
apn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Asphe3_27280
Messenger RNA biogenesis [BR:
apn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Asphe3_27280
Chaperones and folding catalysts [BR:
apn03110
]
Heat shock proteins
HSP60 / Chaperonin
Asphe3_27280
Mitochondrial biogenesis [BR:
apn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Asphe3_27280
Exosome [BR:
apn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Asphe3_27280
Exosomal proteins of other body fluids (saliva and urine)
Asphe3_27280
Exosomal proteins of breast cancer cells
Asphe3_27280
Exosomal proteins of colorectal cancer cells
Asphe3_27280
Exosomal proteins of bladder cancer cells
Asphe3_27280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADX73847
UniProt:
F0M947
LinkDB
All DBs
Position
complement(2912853..2914463)
Genome browser
AA seq
536 aa
AA seq
DB search
MAKQLAFNDAARRSLEAGIDKLANTVKVTLGPRGRNVVLDKKWGAPTITNDGVTIAREVE
LDDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVKEGLRNVAAGAAPGQIKRGIE
VSVEAVAARLLENARPVEGTQVANVAAISAQSDEVGELLAEAFGKVGKDGVITIEESSTT
QTELVLTEGMQFDKGYLSPYFITDADRQEAVLEDALILINQGKISSLQEFLPLLEKALQA
GKPLFIIAEDVDGEALSTLIVNRIRGTLNVVAVKAPGFGDRRKAMLQDIATLTGAQVVSP
ELGLSLDTVGLEVLGTARRITVTKDNTTIVDGAGSAEDVAARVAQLRAELTRTESDWDRE
KLQERLAKLAGGIGVIKVGAATEVELKEKKHRIEDAVSSTRAALEEGIVAGGGSALIHAL
KALDEDPAVKALEGDAAAAVGIVRRALVQPLRWIAQNAGFDGYVITSKVAELDTNNGFNA
KSGEYEDLIAAGVIDPVKVTRAALRNAASIAALVLTTETLVAEKPAEEDEHAGHSH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcagcttgcgtttaacgacgctgcccgccggtctcttgaagccggcatcgat
aagctcgccaacaccgtcaaggtgacgctcggcccccgcggccgcaacgtcgtcctggac
aagaagtggggagctcccaccatcacgaacgacggcgtcaccatcgcccgcgaagttgag
ctggacgacccgtacgagaaccttggcgcgcagctggccaaggaagtagccaccaagacc
aacgatgttgccggcgacggcaccaccaccgcaacggtcctggcccaggcgctggtcaag
gaaggcctgcgcaacgttgcggcaggtgctgcccccggccagatcaagcgcggcatcgag
gtttccgtcgaagccgtcgccgcccgcctgctggagaacgcccgccccgttgaaggcacc
caggttgccaacgtggcagccatctccgcccagagcgatgaggttggcgagctccttgcc
gaggccttcggcaaggttggcaaggatggtgtgatcaccatcgaggaatcctccaccacg
cagaccgagctggtcctcaccgagggcatgcagttcgacaagggctacctgtccccgtac
ttcatcacggacgcggaccgccaggaagccgtcctcgaggacgccctcatcctgatcaac
cagggcaagatctcctcgctgcaggagttcctgccgctgctggagaaggcgctgcaggcc
ggcaagccgctgttcatcatcgctgaagacgtcgacggcgaggccctgtccacgctgatc
gtcaaccgcatccgcggcacgctgaacgtcgtggccgtcaaggctccgggcttcggcgac
cgccgcaaggccatgctccaggacatcgccacccttaccggtgcacaggttgtgtccccg
gaactgggcctgagcctggacacggtgggcctcgaggtgctgggtacggcacgccgcatc
acggtaaccaaggacaacaccaccatcgttgacggcgcaggttcggccgaagacgtggca
gcacgcgttgcgcagctgcgcgccgagctgacccgcaccgagtccgactgggaccgcgaa
aagctccaggagcgcctggccaagctggccggcggcatcggtgtcatcaaggtcggtgct
gcaaccgaggttgagctcaaggaaaagaagcaccgcatcgaggacgccgtgtcctcgacc
cgtgctgccctcgaagaaggcatcgttgccggtggcggctcagcactgatccacgccctg
aaggcactggatgaggacccggccgtcaaggcactggaaggcgacgccgccgctgctgtg
ggcatcgtccgccgtgcgctggtccagccgctgcgctggattgcccagaacgccggtttc
gacggctacgtcatcacctccaaggtggccgagctcgacaccaacaacggcttcaacgcc
aagtcgggcgagtacgaggacctgatcgccgccggcgtgatcgaccccgtcaaggtcacc
cgcgcagccctccgcaacgcagcctccatcgctgccctggttctcaccaccgagaccctg
gtcgccgagaagcctgccgaggaagacgagcacgcaggccacagccactga
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