Pseudarthrobacter phenanthrenivorans: Asphe3_27860
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Entry
Asphe3_27860 CDS
T01435
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Asphe3_27860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apn03021
]
Asphe3_27860
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_27860
Enzymes [BR:
apn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Asphe3_27860
Transcription machinery [BR:
apn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Asphe3_27860
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Asphe3_27860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADX73904
UniProt:
F0M9X4
LinkDB
All DBs
Position
complement(2975555..2976565)
Genome browser
AA seq
336 aa
AA seq
DB search
MLIAQRPTLSEEVVSENRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNIKSLSVSSEHDEPVVAYLRKQGPGVVTAADIAPPAGVEFHN
PDLHIATLNSKGKFELELTIERGRGYVSAAQNKSGDAEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDKLIVDVETKQAIAPRDAVASAGTTLVELFGLARELNTAAEGIEIGPSPTD
AALAADMALPIEDLDLTVRSYNCLKREGIHTVGELVARSEADLMDIRNFGAKSIDEVKAK
LVELGLSLKDSPPGFDLAARAAAIEEDDAAFGDDEL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctctccgaagaggtagtctccgaaaaccgttcgcgt
ttcatcattgaaccgctggaaccgggcttcggctacaccctcggaaactccctccgccgt
accctgctctcctccatccccggtgctgccgtaaccagcatccggatcgatggcgtgctg
cacgagttcaccacggttccgggtgtcaaggaagatgtcactgagatcatcctgaacatc
aagagcctctcggtttcctctgagcacgatgagccggttgttgcctacctgcgcaagcag
ggccccggagtcgtcaccgccgcggacatcgctccgccggccggcgtcgaattccacaac
ccggatctgcacattgccacgctgaactcgaagggcaagttcgaactcgaactgaccatc
gagcgcggccgcggctacgtttcggcagctcagaacaagtccggcgatgcagagatcggc
cgtatcccagtcgactccatctactcgccggtgctgaaggttactttccgcgtggaagca
acccgtgttgagcagcgcaccgacttcgacaagctgattgtcgacgtcgagaccaagcag
gccatcgccccgcgcgatgccgtcgcttccgcaggcaccaccctggtggagctcttcggt
ctggcacgtgagctgaacaccgcagctgaaggtatcgagatcggcccgtcgcccaccgac
gctgccctggcagccgacatggcactgccgatcgaggatctggacctcaccgtccgttcc
tacaactgcctcaagcgtgagggcatccacaccgtgggtgaactcgttgcccgctccgag
gctgacctgatggacatccgcaacttcggtgccaagtccattgacgaggtcaaggcaaag
ctggttgaactgggcctgtccctcaaggactcgcctcccggttttgacctcgcagcacgc
gccgcagcaatcgaagaggacgacgccgccttcggcgacgacgaactctaa
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