Pseudarthrobacter phenanthrenivorans: Asphe3_34220
Help
Entry
Asphe3_34220 CDS
T01435
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn00260
Glycine, serine and threonine metabolism
apn00460
Cyanoamino acid metabolism
apn00630
Glyoxylate and dicarboxylate metabolism
apn00670
One carbon pool by folate
apn00680
Methane metabolism
apn01100
Metabolic pathways
apn01110
Biosynthesis of secondary metabolites
apn01120
Microbial metabolism in diverse environments
apn01200
Carbon metabolism
apn01230
Biosynthesis of amino acids
apn01240
Biosynthesis of cofactors
apn04981
Folate transport and metabolism
Module
apn_M00140
C1-unit interconversion, prokaryotes
apn_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Asphe3_34220
09102 Energy metabolism
00680 Methane metabolism
Asphe3_34220
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Asphe3_34220
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Asphe3_34220
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Asphe3_34220
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Asphe3_34220
Enzymes [BR:
apn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Asphe3_34220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADX74527
UniProt:
F0M4I0
LinkDB
All DBs
Position
complement(3628614..3629936)
Genome browser
AA seq
440 aa
AA seq
DB search
MTAPADVTAFEQVVSPSLDANLAALDPEIAAKIDDELTRQRDGLEMIASENHTAVAVMQA
QGSVLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRIKALFGAGFANVQPHSGAQANASVM
HALIKPGDTIMGLNLAHGGHLTHGMKINFSGKLYNVVPYGVREDTHTVDMAEVERLAQET
KPALIVAGWSAYARQLDFAEFRRIADSVGAYLMVDMAHFAGLVAAGLHPSPVPHAHVTTS
TTHKTLAGPRGGIILTNDADIAKKINSAVFPGQQGGPLEHVIAGKAVAFKIAASEEFRER
QERVLAGARILAERLVQPDVTAKGISVVSGGTDVHLVLVDLRNCELDGQQAEDRLAAIDI
TVNRNAVPFDPRPPMVTSGLRIGTPALATRGFGEAAFREVADIIAEALTADADADLSGLR
HRVEGLAKAHPLYPGVAPLS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccccggcagacgtgaccgccttcgaacaggtggtgtcgccgtcgctggacgcc
aacctcgccgcgctggacccggagatcgccgcgaagatcgacgacgaactcacccgccag
cgtgacggcctggagatgatcgcctccgagaaccacaccgccgtcgccgtgatgcaggcg
cagggctcggtgctgaccaacaagtacgccgaaggctacccgggcaagcgctactacggt
ggctgcgagcacgtggacgtcatcgaacagctcgccatcgacaggatcaaggccctcttc
ggcgccgggttcgccaacgtccagccgcactccggcgctcaggcgaacgcctcggtgatg
catgcgctgatcaagccgggcgacaccatcatgggcctgaacctggcccacggcggccac
ctcacgcacggcatgaagatcaacttctccggcaagctctacaacgtggtcccttacggc
gtccgcgaggacacgcacacggtggacatggccgaggtggagcgcctggcccaggagacg
aagccggcgctgatcgtggccggctggtccgcctacgcccggcagctggacttcgccgag
ttccgccgcatcgccgactccgtgggcgcctacctgatggtggacatggcgcacttcgcc
ggcctggtggccgcggggctgcacccgtcgccggtcccgcacgcgcatgtcaccacgtcc
accacgcacaagaccctcgccggtccgcgcggcggcatcatcctgaccaacgacgccgac
atcgccaagaagatcaactcggctgtgttccccggccagcagggcggcccgctggagcac
gtcatcgcgggcaaggccgtggcgttcaagatcgccgcgtccgaggagttccgcgagcgg
caggagcgcgtcctggccggcgcccggatcctggccgagcgcctggtccagccggacgtc
accgccaagggcatcagcgttgtctccggcggcaccgacgtgcacctggtcctcgtcgat
ctgcgcaactgcgagctcgacgggcagcaggccgaggaccggctcgcggccatcgacatc
accgtcaaccgcaacgccgtccccttcgacccgcgcccgccgatggtcacctcgggtttg
cggattggcacgccggcgctcgccacgcgcgggtttggtgaggctgccttccgcgaggtt
gcggacatcatcgccgaggcattgacggccgacgccgatgcggacctttccgggctgcgt
caccgcgtcgagggacttgccaaagcacacccgctgtacccgggcgtcgcacctctgtcc
tga
DBGET
integrated database retrieval system