Archaeoglobus profundus: Arcpr_0060
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Entry
Arcpr_0060 CDS
T01152
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
apo
Archaeoglobus profundus
Brite
KEGG Orthology (KO) [BR:
apo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apo03400
]
Arcpr_0060
DNA repair and recombination proteins [BR:
apo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Arcpr_0060
Archaeal homologous recombinant proteins
Arcpr_0060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
Rad50_zn_hook
AAA_13
AAA_29
AAA_27
Fib_alpha
Snapin_Pallidin
AAA_21
DUF1664
DivIC
WXG100
Prominin
DUF3450
DUF4201
ABC_ATPase
SbcC_Walker_B
DUF948
FlaC_arch
Prefoldin
GAS
Motif
Other DBs
NCBI-ProteinID:
ADB57136
UniProt:
D2RFR1
LinkDB
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Position
49262..51868
Genome browser
AA seq
868 aa
AA seq
DB search
MLIKYVEIENFKSHRSSRVEFDRGVNLIVGRNGAGKTSILEAIAVALYGVKHGVKPSGVK
KDDLIRDSASRYEIRLGFDFNGRDCLIVRSSDGNSYLRCDKLLEGDERIREWVERNVAPS
HVWLNAIYVRQGEIDEIVKDDERREKIIKRITQIEDYERAWENLGKVIKHFKEEKSRLEK
EIKAESDVENRIKEVKEELEAKKRELDKKMIELRDVEEKLAEAEAEKERVEKLREKFEEL
NREKESIEKHAGKIEERIRGLRERRNGLKKEIEELKSRVRRLEEIRGYAEKYIELREEYE
KTLKVERELKETLARLESERNGVIRLLSDLENKKKRLNELKGKLEEVEKRKSEIEGKALK
YEEIKVKLERLRELEKTCRPLEEIERELEEVERAKLKLKDVEKDERNLLDMKARLESEIE
RLKEALNALKSAKGVCPTCGRLLSEDDRLNLIKSYTKKLENVRKDLIEIENKLEDIKNVK
KELESVISEESRILREYELAKELENLKKSTKGFEEAEAAWKEYRKLEELALKLSADISVI
ESDLKSEQELNSKLIELNSKIDEVEEKLSNLKKIDESTLKELESYYNEFNRLVSAKHDLE
RKLEELKSCESEIVKAEDELSETLKRLESLKNEIEALGYSDETYRNVYNLYTELRSRYFG
LREGVERLKDHIKTLEKSAEDLENRVKKLREKRERVEKIGREVLPKLEEIREKFRKYKVS
LTEYAFKEVEKIASEIFEEMTDGKYSGIVLKREEKRKEKVTVKVLYQGAERDISFLSGGE
LIALGLAFRLALSVFMIQGKIPLLILDEPTPFLDDERRRKLVDIMNRYLKKIPQVIVVTH
DEELRDVADKVIRVELHGGVSKVMEGFE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgctcataaagtatgtggaaattgagaacttcaaatcacacagaagttcgagggtggaa
tttgatagaggtgtaaatctcatagttggtaggaacggtgctggtaagacatctattctt
gaagccatagccgtagcactttacggtgttaaacacggtgttaaaccttctggggttaag
aaagacgatctgatcagagattctgcaagcagatacgagataagactaggtttcgatttt
aacggtcgcgattgtctgatagtgagaagtagcgacggaaactcctacttgagatgtgac
aaactcctcgaaggtgatgaaaggatcagagagtgggtggaaagaaacgtagctccctct
cacgtgtggttgaacgccatatacgttagacagggagagattgatgagatagtcaaggat
gacgagaggagggagaagataatcaagagaataacgcagatagaggattacgaaagggct
tgggaaaatctgggtaaggtgatcaagcacttcaaggaagagaaaagtaggctcgaaaag
gagattaaagctgaaagcgatgtagaaaacaggatcaaagaagtgaaagaggagcttgaa
gcaaagaaaagagagcttgataaaaaaatgattgagctaagagatgttgaagaaaaatta
gctgaagctgaggctgagaaggagagagttgaaaagttgagagagaagttcgaagagctg
aatagagagaaggaaagcattgagaaacacgctggaaagattgaagaaagaatcagaggt
cttagggagagaagaaacggcttaaagaaggaaattgaggagcttaaatcgagggttagg
aggcttgaggaaataaggggatatgctgaaaaatacattgagcttagagaggagtacgag
aaaactttgaaagtggaaagggagcttaaggaaaccttggcaagacttgagtcggaaagg
aatggagtaatcagattgttaagcgatcttgagaataaaaagaagagattgaacgaattg
aaaggtaagcttgaggaagttgaaaaaaggaagtctgaaatcgaaggcaaggctttgaaa
tacgaggagataaaggtaaaacttgaaagattgagggagcttgaaaaaacttgtagacct
ttagaggagatcgaaagagagcttgaggaagttgaaagagctaagttgaagcttaaagat
gttgagaaagatgaaaggaatttgctggatatgaaagcaagattagaaagcgaaattgag
aggttgaaagaagctttgaatgcattaaaatccgcgaaaggtgtttgtccgacatgtggt
aggcttctgagtgaagatgatcgcttaaatctcataaaaagttacacgaagaagttagaa
aacgttagaaaagatttgattgaaatcgagaataaattggaggatataaagaacgtaaag
aaagaacttgaaagcgtaatttcggaggaaagcaggattttaagggaatatgagcttgct
aaggagttggaaaatttaaagaagtctactaagggtttcgaagaagctgaagctgcttgg
aaggagtacagaaagctagaagagttggccttgaagctgtctgctgacatatcagtaata
gaatctgatcttaaatctgaacaggagttgaactcaaagttgattgagctaaactcgaag
attgatgaagttgaagaaaaattgagcaatctgaaaaaaattgatgaaagcactttgaaa
gagcttgagtcttattacaacgagtttaacagacttgtaagtgcgaagcacgatttggag
agaaagcttgaggaactgaaatcttgtgaatctgaaatcgtcaaagctgaagatgaactt
tcagaaaccctaaaaaggctggaaagcttgaaaaatgagatagaagctcttggctatagt
gatgaaacttacaggaatgtttacaacctatatactgaactgaggagtagatacttcggt
cttagagagggcgttgagagactcaaagatcatataaaaaccctcgagaaaagtgctgag
gatttggaaaatagggtgaagaagcttagggaaaagagggagagagttgagaagataggc
agagaagtgttaccaaagcttgaagagataagagaaaaattcagaaagtacaaggtaagt
ctgacggaatacgctttcaaagaagttgagaaaatagcaagtgaaatttttgaggaaatg
accgatggaaagtattcgggaatagttcttaagagagaggaaaaaaggaaagagaaggtc
acagtaaaggtgttgtatcagggtgctgagagggacataagcttcctaagtggtggagaa
cttattgctctcggcttagccttcaggttggctctttcggttttcatgattcaggggaag
attccactgcttattctggatgaaccgactccattcttggacgatgagagaaggagaaag
ctcgtggatataatgaaccgctatctaaagaagattccacaggttatagtggttactcac
gatgaagaacttagagacgttgctgacaaagttataagggtggagttgcacggcggagtt
tctaaggttatggagggttttgaatga
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