Archaeoglobus profundus: Arcpr_0511
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Entry
Arcpr_0511 CDS
T01152
Name
(GenBank) KH type 1 domain protein
KO
K03679
exosome complex component RRP4
Organism
apo
Archaeoglobus profundus
Pathway
apo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Arcpr_0511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apo03019
]
Arcpr_0511
Messenger RNA biogenesis [BR:
apo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Arcpr_0511
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Arcpr_0511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N_2
RRP40_S1
S1
ECR1_N
KH_6
RRP4_S1
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADB57577
UniProt:
D2RH02
LinkDB
All DBs
Position
434694..435539
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AA seq
281 aa
AA seq
DB search
MAEVSRKIVLPGDLLSTNPKTAGPNTYVEGNKVYARVLGLLDKTETMVKVIPLKGRYVPS
LGDTVIGIVKEVTANGWIVDILSPYVAFLPVQENPAMRPNKKPNEVLDIGDAIIAKVMNI
DPKMRVTLTMKDKLCRPIRVGRIVVINPTRVPRVIGKKGSMIKLLKSELDVQIIVGQNGL
IWINGDRRKVSIAEEAIYIIEQEAHTEGLTDRIAEFIKKRKVEMGLAKPEEVEKEEVEEK
AEELGKTEVEEERTEEVKMEEKPEESLEIPPEIPEERLKGE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtaagtaggaagatcgttttacctggtgatctgctatcaactaatccaaag
accgcaggaccgaacacgtatgttgaagggaataaggtttacgcgagagttttgggtttg
cttgacaaaacggagacgatggttaaggttattccgcttaagggtaggtacgttccctcc
ttgggggacacagttatcggcatcgttaaggaagtaacggctaacggttggattgtagat
attctttcaccctacgtagcgtttttaccggtgcaagaaaatccagccatgagacccaac
aagaagccgaacgaggttttggatataggagatgcgataattgcaaaggtaatgaacatt
gatccgaagatgagggttactttgaccatgaaggacaagctctgcagaccgattagagta
ggtagaattgtcgtgataaatccaacgagagttccgagagttatagggaagaagggtagc
atgatcaaattgctcaaatcggagttggacgttcagataatagtcggtcagaacggtttg
atttggataaacggagataggaggaaagtttcaattgccgaggaggctatttacataatc
gagcaggaagctcataccgagggcttaactgacagaatcgctgagtttatcaagaagaga
aaggtggaaatgggattggcaaagccagaggaagtagagaaagaggaagttgaagagaag
gctgaagaactcggcaaaactgaagttgaggaggagagaactgaagaagtaaagatggag
gaaaagcctgaagagtcgttggaaattccgccagaaattcccgaggagaggttaaagggt
gagtga
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