Archaeoglobus profundus: Arcpr_1312
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Entry
Arcpr_1312 CDS
T01152
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apo
Archaeoglobus profundus
Pathway
apo03410
Base excision repair
apo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Arcpr_1312
03430 Mismatch repair
Arcpr_1312
03440 Homologous recombination
Arcpr_1312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apo03400
]
Arcpr_1312
DNA repair and recombination proteins [BR:
apo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Arcpr_1312
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Arcpr_1312
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Arcpr_1312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ADB58361
UniProt:
D2RE17
LinkDB
All DBs
Position
complement(1124911..1126290)
Genome browser
AA seq
459 aa
AA seq
DB search
MKEILKRARELADKIKKREYVKIVTHIDADGITSGAIAFESLRRAGIDCEIKFVKNLDSK
KIEELSNEFVWFTDLGSGCIKDIVRFKLDCVITDHHIPEGYYRYQLNPHDFGYDGSYDLS
GSGATYLVAKFLNPMNHVDLIQLAIVGAIGDLQDSKNCKLVGLNKFLIEEGVKHGFLKVE
KDLRFFGKQTRPVFKMLEYNFDPYIPGVSGSERGSIELLRRLGIPLKDEDWRRWIDLSRG
EKRAVVSELVRICMKHGYPLSYIKRIVGECYILTKQVEGTELRDAMEFSTLLNATARYSK
ADIGLRVCLGILNGCDEWAFKKARKLLQQHRKNLSEGIKIALDRLREFKSVQFFHARDDI
LDTIVGIVAGMCYCKANLDKPIVAFANCDEGVKVSARATQRLVEKGLNLAKAIEIACRKV
GGHGGGHKIAAGAIIPKGKEWEFLEEFNRVVEGQIKAQP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagattttgaagagggctagagaactagctgacaagataaaaaagagggaatac
gttaaaatcgttactcatatagatgcagatggaattacgtcgggtgcgatagcttttgaa
agtcttaggagggcgggaattgattgtgagattaagtttgtcaagaacttagattctaag
aaaattgaagaactttcaaacgagttcgtctggtttacggatttgggtagcggttgtata
aaagacatagtgagatttaagctcgattgcgttataactgatcatcacattcctgaaggt
tactacagataccagctaaacccacacgatttcggatacgatgggagttacgatttgagc
ggttctggagcgacttatctggttgcgaagtttttaaatcctatgaaccacgtagattta
attcaattggcgatcgttggagctataggagatctgcaggactctaagaactgcaagctc
gttggattgaacaaatttctgattgaagagggagttaagcacggatttttgaaagttgaa
aaagatctgaggtttttcggcaagcagacgagacctgtttttaagatgcttgagtacaac
tttgatccctatataccgggcgttagcgggagtgagagggggtctatagaacttttgaga
aggctgggaatccccttaaaagatgaggattggaggagatggatagatttgagtaggggc
gagaaaagagcggttgtttccgagcttgtgaggatatgcatgaagcatgggtaccctttg
agctacataaagaggatagtcggggagtgctacatactgaccaaacaggttgagggaact
gagctcagagatgctatggagttttcaacgcttctgaatgcaactgcaaggtatagcaaa
gctgacataggtttgagggtttgcttgggaattttgaacggatgtgatgaatgggcattc
aagaaggctcggaagctgttgcaacaacaccgcaaaaacctatctgaaggaataaagatt
gctctcgataggttgagggagtttaagagcgttcagttcttccatgcaagggatgatata
ctggatacgattgtaggaatagtggctggcatgtgctattgtaaggcaaatttggataag
cctatagttgccttcgcaaactgcgatgaaggagttaaggtttctgcaagggcaacacaa
agactcgttgaaaaaggcttgaatttggctaaagctatcgaaatcgcttgcagaaaggtg
ggagggcatggagggggtcacaagatagcggctggagctataataccgaaggggaaggag
tgggaattcttggaagagttcaacagggttgtagaaggacagatcaaagctcaaccttaa
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