Archaeoglobus profundus: Arcpr_1559
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Entry
Arcpr_1559 CDS
T01152
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
apo
Archaeoglobus profundus
Brite
KEGG Orthology (KO) [BR:
apo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apo03016
]
Arcpr_1559
Enzymes [BR:
apo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Arcpr_1559
Transfer RNA biogenesis [BR:
apo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Arcpr_1559
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Gp-FAR-1
HVSL
PsaF
BRO1
ARM_LRRK2
Motif
Other DBs
NCBI-ProteinID:
ADB58605
UniProt:
D2RER1
LinkDB
All DBs
Position
complement(1320444..1320995)
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AA seq
183 aa
AA seq
DB search
MRLFVAVDLSDEVREKMNNVLKTFKDFKGVKTVEKENLHITLMFLGEVPDRRVEVIKEKL
REIKSEPFKIRLKGLGSFPPQGNIRVVWVGVEEGEENLKVLADAVESSLRSLGFKRDKDF
VAHATVARVKRLAPSDKERLLKVVEKYKDYDFGEMVVDVFKLKKSTLTPKGPIYEDIEVY
RLE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgttcgtagctgtagatttgagcgatgaagtcagagagaaaatgaataacgtc
ctcaagacctttaaggactttaaaggagttaagaccgttgaaaaggagaacttacacatc
acactgatgttcttgggggaagtgccagatagaagggttgaagttatcaaggaaaagtta
agagaaataaaatccgagccgttcaagatcaggttaaagggtttgggaagctttccacct
cagggcaacatcagagttgtgtgggttggtgttgaggagggtgaagagaacttgaaggtg
ttggctgatgccgttgaaagctcgctcaggagcttgggattcaagagagacaaagatttt
gtagctcatgccacagttgcgagggtaaagagattggctccttccgacaaagaaagactt
ttgaaggttgttgagaagtacaaggactacgactttggagagatggtggttgatgttttc
aagctcaaaaagagtactctaacacccaagggaccaatttatgaagatattgaggtctac
agacttgaataa
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