Arthrobacter polaris: J0916_11005
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Entry
J0916_11005 CDS
T08694
Name
(GenBank) type IV secretion protein Rhs
Organism
apoa
Arthrobacter polaris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
UIK87987
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Position
2687986..2693667
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AA seq
1893 aa
AA seq
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MTEFVETPLLPVSDAEHGGMFSYSTAGSVKSGFELAATDLEGKAGTRGPLSVQRCRSFRV
ISRGFSENAAVAATDAAALAQALRAVADLVGQLVEAAREEDTRRKQNNEWVREHNSRDGW
DEFRDWWSGAKGNVPTRSSGPPTVPVPAPATRPRQNPPKGGGFGGGTSSARPEDLEVFAA
NSRGLDQDLAGTPGXARDPVEIVGWRLVMGKIDTNGLXDAYKQFLAANEADAAWALTVAA
SFAAAGGSGAVSTLSDAAINEALAAAGASTGRSSLVIPPMTAGAKPTSGYANDPVNTSTG
NFIEPETDLGFAGAASNLVFSRMYNSMGSGLXHPGVFGPGWASVLDQFLILSDEGCRWVM
ADGRAVDFPRAGSGWDRAVGENLWLSKEPVNTPALAELSSVPSATIELLVIRDNQGAWWA
YSLAGVWCGAGTAPGTTVSVVREEMTDGARAGSVRRLEHVRGRFVEIEYVGGLAAVVRAC
DGRRVEYGYDAAGQLVSVATEFGVRKYRWNEQGLIEAVFSTAGVLEAENSYDADGRVVLQ
VTQHGRRTRFAYLPGRVTVVSDEDGTRSNSWVADAKGRLIGVLDSHDQRQSMAYDPHGNL
VSFTERDGALTLHAYDVRGRKTRTVTPEGADLTYGWDAQDRITTLVTASGALISYEYADD
LSRDPSVILDALGGRTELEWRNGQLMALRDPARVRLGFEYDQFGDLIATSNAVGDVARIN
RDQAGRPVTAXHPSGATTRYSYDSAGSLLSREDPDGAVWGFEHDPAGRLRATVAPDGGRT
ELHYAPNGEMVRSIDPLGRSIERVFDELGNVTSAVLDDGTKWGFTHDTLSRLVSITDPAG
HDWVREYDTVGALRAVIDPTGVRTDTTTDRKAGTATLEDAFGSATLSFDEFGRPTRVDTE
DGSAELINYDAAGNPVELLDGEGALTVLGRDVAGKITSITSPTGAVTEYEYDECGRPWKT
RXPLGATTELTYDTDQRVASKTLPTGESETFTYDPCGRLITRWSPGQGLSRYGYDKVGRL
NFAQDTWYGTRRFAYNTAGELIRSTNGVGGKTRFEYDTRARLISITDPVGGLTTRTYTAT
DDVASVTDPLGRVTTATYDPAGRQLSQTDPQGHTTTWTYDKGGRETSTSFNGKLLAAVER
DLIRRCVVITDYTAGDGLGVEHALGFDRRGLLTSRTRGTQGMSWEYDGDGNRTRFTDTHG
NTTTYARDAAGHVTAINNSXLGEATFTHDPSGRIISATAADLVQAWVYRNGALAEHTRTX
XPRRVAGVSADVTMIGRDPDGRITALTRDGVVTRYGYDSAGQLTTATTSGDQDSPVVVVG
WEYDVXGPARIRNPPDGVRVYAYDTAGQLLSVTEPDGSGTEYVHDGLGRRTRLIGPDGSW
SEYAWGPTGHLKALXQPHPDGSEIARHELWVDALGELASVDGTELWWDTTNPVPTLAGIN
NQQVLSLPGGLTGAGEVWLTPGWRAARPTEQTDPWAVLGTTNALPAGVNLTGNGGVDVAG
LEWLGARAYDPATKAFLSTDPLAPVLGAGWARNPYAYAGNXPLNTTDPTGXKPLTDAELS
AYDGSSRGAMAAAGDFMAENWEYFAGGAMVIAGGVLMATGVGGPLGLALVGAGADTIIQK
ATTGEVDWGRVALTGAVGIIAGPLAGKVSGAVASGLGRAGTALSTRALPAAVRAGSAAVS
GAGRAGAVVSGVXVHALVLLWFPGPAELARLCQCRFSGWNCCRVGVSRVSSSAGGYVTGL
PGQQMLRSAVTNGVSGGVTNTGMYALTTPQDDWSLRGVGSAALGGAVTGVVSSQAGHLAA
AGPSRLAQLTQYGVASGGAVAGGAVDHALTNRSYDLGEMVVDGVGGGVLSHFPAASALSP
SPGWMDHTFAAYGGAHASAIVGSIKFIGAEVMP
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaatttgttgaaacgccgttgctgccagtttctgatgccgagcatggaggaatg
ttcagctattcaacggcaggctctgtgaagtcnggctttgaactggccgccactgatttg
gagggcaaggctggcacgcggggacctttgtcagttcagcgatgcaggagtttcagggtc
atttctcgagggttttccgagaacgccgctgtcgcggcaacggacgcggccgcgttagcc
caggcgttgcgcgcggtggcagatttggtggggcaactagttgaagctgcgagggaagag
gacacccggcgcaagcaaaacaatgagtgggtccgggagcacaatagccgggacggttgg
gacgagttccgggactggtggtctggggcgaaagggaacgtcccaacgcggagctcggga
ccgcccacagttccagtccccgccccggcgactaggccccgtcaaaacccgccgaaaggt
ggcggttttggtggtgggacctcatctgcgcgcccggaggatctagaggtgttcgcggcg
aactctcggggactggatcaggacttggcgggtacaccggggnncgctagagacccagtt
gaaatcgttggttggcgactggtcatggggaaaattgacactaacggtcttttngatgcc
tacaaacaatttttggctgctaatgaggctgatgctgcgtgggcgctgacggttgctgct
agctttgctgctgcgggcgggtccggggctgtgtctacgctttctgatgctgcgatcaat
gaggcgttggctgctgccggtgccagtactggccggtcctcgttggtgatcccgccgatg
actgctggcgcgaaaccgaccagcgggtacgcgaacgatccggtgaacacttccacgggt
aactttattgaacccgaaacggatctgggcttcgctggtgccgcaagcaatctggtgttc
tcccggatgtataactcgatgggttctggccttgancaccctggtgtgtttgggccgggc
tgggcctcggtgctggatcaattcctgatcctctccgatgagggatgccggtgggtcatg
gcagatggccgggccgttgatttcccgcgtgctggttccggctgggaccgtgctgtggga
gagaatttatggttatccaaggagccggtgaacaccccggcattggctgagttgagttcc
gtccccagtgcnacgattgagcttttagtgatccgggacaaccagggcgcgtggtgggcg
tatagcctcgccggtgtttggtgtggtgccgggactgccccnggcaccactgtctcggtg
gtccgggaagagatgaccgacggcgcacgggcgggttcggtacgcaggcttgagcatgtg
cgnggtaggttcgtagagattgagtatgtgggcgggcttgccgccgtggtgcgtgcctgc
gatggccgccgggtcgagtacgggtacgatgccgccgggcagctggtcagtgtggccaca
gagttcggggtccgcaagtaccgctggaatgagcagggcctgatcgaggccgtgttctct
actgccggggttcttgaggcagaaaacagctacgacgccgatgggcgggtggtgctgcaa
gtcacccagcatgggcgcagaacccgattcgcgtatctgccgggcagggtcacggttgtt
tccgatgaggacggcacccgatcgaactcgtgggttgctgacgctaagggccgcctgatc
ggtgtccttgattcccatgatcaacgccaatccatggcgtacgacccacacggaaacctg
gtgtccttcaccgaacgcgacggcgccctgacactgcatgcctatgacgtgcgtggccgn
aaaacacggaccgtgaccccggaaggcgcggacctcacctacggctgggacgcccaagac
cgcatcactaccttggtcaccgcctcgggtgcactcatttcctacgagtatgctgacgat
ctttcccgggacccctcagtaattctggacgcgttgggcggccggacagaactggagtgg
cgcaacgggcagttgatggcgctgagggacccggcacgggtccgtctcggattcgagtac
gaccagttcggggacttgattgccacctccaacgcggtcggagacgtggcccggatcaac
cgcgaccaggccgggcggccagtcaccgcgatncacccttcaggagccaccacccggtac
agctatgacagtgccggatcattgctcagcagggaagaccccgacggcgcggtatggggt
ttcgaacatgatcctgccgggcggctacgagccacagtagcmcccgatggtggccgcacc
gaactccactacgcacccaatggtgaaatggtccgcagcattgatccgctcgggcgcagc
atcgaacgggtatttgatgaactcggcaacgtcaccagcgccgtgttggacgacgggacg
aagtggggattcacccacgacaccctctcgcgcctagtgtcaatcaccgaccctgccggg
catgactgggtccgagaatacgacaccgtcggtgccctgcgtgctgtgattgaccccacc
ggggtccgcacggacaccaccaccgatcgcaaggctgggaccgcgacgctagaagacgcc
ttcggctcagcaaccctgtccttcgatgagtttggccgccccacccgtgttgacacggag
gatggttccgccgaactcatcaactacgacgcggccgggaaccccgtggaactcctcgac
ggcgaaggcgcactgacagtgttgggccgggacgtggcaggaaaaatcacctcgatcacc
tcacccaccggtgccgtgaccgagtatgaatacgatgaatgcggacggccctggaaaacc
cgtgancccctcggcgccaccaccgaactcacctacgacactgatcagcgcgtagcctcc
aaaaccctgcccaccggggaaagtgaaacgttcacctatgatccatgcgggcggctcata
acccggtggagcccaggccaaggcctctcccgctacggttacgacaaggtagggcggttg
aactttgcccaagatacttggtacgggacccgccgtttcgcttacaacactgccggggaa
ctgatccgcagcaccaacggtgtgggaggcaaaacccggttcgaatacgacacccgggcc
cgcctcatcagcatcaccgacccggtcggtgggctcaccacacgcacctacacagccacc
gacgatgtcgcgtcagtaacagatccactgggccgggtcaccaccgccacttatgacccc
gccggacgtcaactctcccaaacagacccccaaggccacaccaccacctggacctacgac
aaaggcggccgcgaaacctccacgtctttcaatgggaaacttctggccgcggtggagcgt
gatctgatccgccgctgcgtggtcatcactgactacaccgccggtgacgggctaggtgta
gagcacgcgctcggctttgaccgacgcgggctcttaacctcccgcacccgcggcacccaa
gggatgtcttgggagtacgacggcgacgggaaccgcacccgctttaccgacacccacggg
aacaccacaacctatgctcgtgacgcggcagggcacgtcaccgcgatcaacaactcctgn
ctcggtgaagcaaccttcacccacgacccgtccgggcggatcattagtgccaccgccgca
gacctagtccaggcgtgggtttaccgcaacggcgccctggccgaacacacccgcaccaan
ncaccccggcgggttgctggggtgagcgctgatgtgacgatgatcggccgtgaccctgac
ggacggatcacggccctgacccgtgacggtgtcgtgacccggtacgggtacgacagtgcc
gggcaactcaccaccgccaccaccagtggtgatcaggattcaccggtcgtggtggtgggg
tgggagtacgacgtnncggggccggctcgtatccgaaaccctcctgacggggtccgggtg
tatgcctatgacactgccgggcagttactttctgtcacggaacctgacggatcaggcacc
gagtatgttcatgacgggctaggccggcggacccgcctcattggcccggatgggtcatgg
agtgaatacgcgtggggacccaccggacacctcaaagcactnnaccaaccacaccccgat
ggcagtgaaattgcccggcacgagttgtgggttgatgcgctcggggaactcgccagtgtt
gacggcaccgagttgtggtgggacaccacgaatccggtccccaccctggcaggcataaac
aaccagcaggtcctgtcccttcccggtggtctcaccggtgccggggaagtctggctcacn
ccgggctggcgcgcggcccgccccactgagcaaacagatccctgggctgtcctgggaacc
actaacgcactaccagccggggtgaatttgaccggtaatggcggggtggatgttgcagga
ctggaatggctcggcgcccgggcctatgacccggccaccaaggcgtttctctctactgat
cctctcgccccggttctgggggcggggtgggccaggaacccctacgcctacgcaggcaac
aancccctgaacaccacagaccccaccgggttnaagcccctgaccgatgctgaactctcc
gcctacgacggctcctcccggggcgcgatggcagccgccggtgacttcatggccgagaac
tgggaatactttgctggcggggcgatggtgatcgctggcggtgtgttgatggcgaccggt
gtgggtgggcccctgggtttggcgttggtaggtgctggcgcggacacaattattcaaaag
gcaaccaccggtgaggtcgattggggtcgggttgcattgacgggtgctgtggggatcatt
gctgggccgttggcaggcaaggtcagcggtgctgttgcatccggtttgggccgggcgggg
actgcgttgagtactcgtgcgttgcctgcagctgttcgtgcgggttctgcagcggtttcg
ggtgctgggcgggccggtgctgtcgtttcgggtgttnnggttcacgcgttggtactgctg
tggtttccggggccagccgagctggctcggctttgccagtgccggttctcgggctggaac
tgctgtcgcgtcggggtttctcgtgtcagttcaagtgctggtggctatgtgacgggattg
cctggccagcaaatgcttaggtcagcagtgaccaacggngtctctggtggtgttacaaac
acgggcatgtatgcgttgacaacaccacaagatgactggtctctcaggggtgttggctcc
gcggcgttaggtggggctgtcactggggttgtgagttcgcaagcagggcatttggccgca
gccgggccgagccgcttagcacagttgactcaatatggtgttgcgtcaggtggtgctgtg
gctggtggagcggtggatcatgcgctgacaaatagaagttacgatcttggggagatggta
gtcgatggtgttggtggcggcgtactatcgcatttccccgcagcgtctgcgttgagcccc
agtccgggctggatggatcatacctttgcagcctacggaggcgctcacgcctcagctatt
gtcggaagtattaagttcataggtgcagaggtgatgccgtaa
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