Arthrobacter polaris: J0916_11300
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Entry
J0916_11300 CDS
T08694
Name
(GenBank) type IV secretion protein Rhs
Organism
apoa
Arthrobacter polaris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
UIK88038
LinkDB
All DBs
Position
complement(2762902..2768130)
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AA seq
1742 aa
AA seq
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MTEFVEMPMLPASDASDGXXFSYSVAGSVKLAFESAASRLEEQAGSRTPFVSPRGRXFKG
HFSDVXTANAQTASQDAKTLASALRTVAGYVGQMAQAGHEEDARREKNNSWVREHNDRNA
LEEARDWLFGEXERPNAAPGNAPTFAPAAAAIGSRNTPPPGGGYGXGTSSARPENLRSFA
GNSRGLDEGLSAAPGSLEGHLSNFKSNCYWGLIDASGVIGAYREYLRANENDAKWAVIVA
DAFAAAGGEGNISTVSNAAVNEALAAAGVSASRSTLVVAAPMAAGAMPTSGYANDPVNTA
TGNFIEPETDLGFAGSASSLALTRMYNSLASGLEVPGVYGPRWASVLDQFLILSDAGAXW
VMADGRAVDXPREXSGWSRGVGENYWLSRESVTATSLTELSSLPEDAPDVLVVRNNQGNW
WAYSLAGVWLGSGSGPGRTVSVTREEMADGGSVGRVTRLGHVHGRFLDVEYVDGIVAVIR
ASDGRCVEYTYDTASRLTGVATELGTRTYRWNEHGLIEAVVSAAGVLEAENTYDEQGRVI
LQVTQHGRRIRFAYLPGRVTVVSDEDGSRSNSWIADAKGRLIGVLDSHDQRQSMAYDGHG
NLVSFTERDGSVTVNAYDXAGPKTRTVTQEGADLSYGWDQQDRITTLVTETGSVVAYEYA
DEVSRDPSVILDPLGGRTELHWLNGHLARVVDPAGVAVQFEYDGFGDLVSTRNSAGDIAR
IVRDHAGRPVAAISPSGAETRFGYDAAGVLVRREDPDGALWSFEHDHAGRTTASIAPDGG
RTELEYALNGELIRTIDPLGRSIERVFDELGNITSAVLGDGARWGFSHDTLSRLVGVTDP
AGHGWVREYDKVGALSAVVDPTGVRSEATADRKAKTATLTDAFASSTYTFDEYGRPTRVN
AVDGSAELISYDAAGNPVELLDGEGGLTVLGRDVAGKITSVTSPSGAVIRYEYDXLWTAL
KTTDPLGAVTETSYDADQRVTARALPTGEVEIFEYDVCGRLVLRRTPGQGVSRYGYDKTG
RLNFSQDCWYGTRRFKYNEAGELTETINGVGGRTRFNYDLRGRLVKITDPVGGVTTRTYT
AIDVVSSVTDPLGRVTSASYDAAGRQLSQTDPDGHTTTWTYDKGGRETSTSFDGKLLAVV
ERDLIRRRVFVTDHTAPDGLTVEHELTFGRNKQLTSRTRGGQRLSWDYDADGNRTAFTDA
NGTTTEYTWTPRAVTAVNNXLLGEAVFTHDPSGRIISATAGDLVQEWAYRNGHLSEHSRS
DRTDRNAAETTMIGRDGDGRITALTRAGAVSRYGYDGAGQMVQAVTTPSGELGFPASSSE
WEYDVGGRLIRESTPXGVGSYEYDAAGQLLAVTDAYGTRAEYVHDXVGPTYPGIRADGSW
AEYAWGHTGYLTGTIERTPDGIEISRHELWVDALGELAAVDGSELWWDTANPIPTLTGIG
GGQVLSLPGGLTGIGDAWIAPGWRAARPTEQRDPWAVIGTPTVPPIPAAQPVPPVXGRRL
GTGQRVPAGISLTGNGGLDVAGLEWLGARAYDPATRGFLSTDPLSPVLGAGWDGNXYAYA
GNNXLNTTDPTGLRPLTDAELKAYDGSTRGAMAAAGDFMADNWEYFAGGAMVIAGGVLIA
TGGGPAGMMLIGAGADTIIQKATTGEVNWXQVALSGALGGFGGASIAARAGFTGMKATVV
AGASSGGISGGIQGTYGYYSGPGPHTISGAVGATGQGLAFGTVLGGAGSVAGSYITRGLM
RP
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagtttgttgaaatgccgatgttgccagcttctgatgcctctgatgggngangg
ttcagctattctgtggccggatcggtgaagctggctttcgagtcggcagcatctaggctc
gaggagcaggcgggttcgcggaccccgttcgtctcgccgcgcgggcggnacttcaaaggg
catttctctgacgttnttaccgctaacgcgcagaccgcaagccaagacgcgaaaacattg
gcttcggcgttgcgtacagtggccggctacgtaggccagatggcccaggctgggcatgaa
gaggacgcccggcgtgagaagaacaacagttgggtccgggagcacaatgaccgcaacgca
ttagaagaggcacgggactggctgttcggggaanaagaacggccaaatgcggctccggga
aacgctcccaccttcgccccggcggcagctgccattggaagccggaatacaccaccgcca
ggtggcggttacgggngcgggacatcctcagcacgtccagaaaatcttcgatccttcgct
ggcaattcgcggggcctggatgaaggattatctgcagcgcccggatcgctggaaggccac
ctctcaaattttaagtccaattgctattggggacttattgatgcatccggggtaatcggc
gcctaccgggagtacctcagggccaacgagaacgacgccaaatgggcggtgattgttgcg
gacgctttcgcggccgccggcggtgaaggaaatatctccactgtctcgaacgctgccgtg
aatgaggcgctggcagcagcaggagtcagtgccagccggtccacgctggtggtggctgcg
ccgatggcggcaggcgcaatgcccaccagcgggtacgcgaacgatcccgtgaataccgcc
accggaaatttcattgagccggaaacggatctaggttttgctgggagcgcctccagccta
gcgctgacgcggatgtacaactcactggcttcgggactggaagtgcccggagtttatggt
cccaggtgggcctcggtgctggatcagttccttatcctctctgatgcgggggccnggtgg
gtgatggcagatggccgggccgtcgatnttccccgtgagnggtccggctggagtcgtggc
gtgggcgagaactattggctctcccgtgagtccgtgactgcaaccagcctcacggagttg
agttccctaccggaggatgcgccggatgttttggtggtccggaacaaccaaggtaattgg
tgggcttacagcctcgcaggtgtttggctcgggtccggctcggggcctggccggacagtg
tcggtgacccgggaagagatggccgacggcggcagtgtgggccgtgtgacccggctgggg
cacgtgcatggccggttcctcgatgtggaatacgtggatgggatcgttgctgtcatccgg
gcctcggacgggcgatgtgttgaatatacctacgacaccgccagcaggctgacgggtgtg
gcgaccgaactcgggacacggacgtaccggtggaacgagcacggactgatcgaagcagtg
gtttctgccgcgggtgtcctcgaagcggagaacacctacgacgaacaaggcagggtcatc
ctgcaggttactcagcacgggcgtaggatccgtttcgcgtatctcccgggccgtgtcaca
gtggtctccgatgaggacggttcccggtcaaactcgtggatcgcggatgccaaaggccgc
ctgatcggcgtattggacagccatgaccagcgccagtcgatggcctacgacggccatggg
aacctggtgtctttcaccgagcgtgacggatcagtcacagtcaacgcgtatgacngtgcg
gggccgaaaacacggactgtgacccaagaaggcgcggacctcagctacggctgggatcaa
caggaccggatcaccaccttggtgacagagaccggttcagtggtggcctatgagtatgcc
gatgaggtatcgcgggatccttcagtaatcctggacccgctgggcgggcgcactgaactg
cattggctcaacggccatctcgcccgggtggtggaccctgccggggtagcggtccagttc
gagtacgacgggttcggggacctagtctcaacccggaactcagccggtgacatagcaaga
attgtccgcgaccatgcgggccgtccggtggcagcaattagcccttccggggccgagacc
cggtttggctatgacgctgcgggcgtgctggtgcgccgtgaagacccggatggtgccctc
tggtccttcgaacacgatcacgcggggcggaccacagcatcgattgcgccagacggcggg
cggaccgaactcgaatatgccctcaacggtgaactgatccggaccatcgatccgttgggg
cggtccattgagcgcgtgttcgatgagctcggcaatatcaccagtgcggtgctgggcgac
ggtgcacgctggggcttttcccacgacacgctttctaggctggtgggagtgacagatcct
gccggacacggttgggtccgcgagtatgacaaggtcggtgccttgagcgccgtcgtggac
cccaccggggtccgttctgaggccaccgcggaccgcaaggccaaaacggccaccttgacg
gatgcatttgcgtcctccacgtacacctttgacgagtatggacgccccacccgtgttaat
gctgttgatggttccgcggaactgatcagttatgacgcggccgggaacccggtggaactc
ctcgacggtgaaggcggcctcacggtcctgggccgtgacgttgctggaaaaattacctcg
gtcacctcgccctccggcgccgtcatccgctatgaatatgacnggctgtggacggccttg
aaaaccacggatccactcggcgcggtgacggaaacgtcctacgatgctgatcagcgggtc
accgcccgtgcactgcccacgggcgaggtggaaattttcgagtatgacgtgtgtgggcgg
cttgtcctccgccggacncccggtcagggcgtgtcgcggtacggatatgacaagacgggg
cggctgaacttttcgcaggactgctggtacggtacccgtcggttcaaatacaacgaagcc
ggggaactaaccgagaccatcaatggtgtgggtggacggacccggttcaactacgatctc
cggggncgtctggtcaagatcaccgaccccgtgggcggngtaacaacccgtacctatacg
gccatcgacgtggtcagctccgtcaccgacccgctcgggcgagtgacctctgccagttat
gatgcggccggacgtcagctctcccagacggacccggacggacacaccaccacttggacc
tacgacaagggtggtcgcgaaacctccacgtctttcgatgggaagctgctggccgttgtc
gaacgtgacctgatccgacgccgggtgtttgtcactgaccatacggctccggatgggctg
acggtagagcacgagctgacgtttggccggaacaagcagctgacctcccgcacccgcgga
ggccagcggttgtcttgggattacgacgccgacgggaaccgcaccgcattcaccgacgcc
aacggaaccaccaccgaatacacctggacgccgcgggcggtgaccgcggtgaacaacncc
ctgctcggggaggcggtgttcacccatgatccttccgggcgtatcatctccgccaccgca
ggggatctggtccaagaatgggcctaccgcaacgggcacctatccgaacacagccgcagc
gaccgcacagaccggaacgctgccgagaccaccatgatcggccgcgacggggacggccgg
ataacggcactgacccgcgccggtgcagtgagccggtacgggtatgacggtgctggacaa
atggtccaggccgtaaccactcccagcggtgagttggggttccctgcctcatcctctgag
tgggagtacgacgtcggagggcgtcttatccgcgaatccacgccgncgggggttggaagt
tatgaatacgatgccgcggggcagcttctggctgtcactgatgcttatggtacccgggcg
gaatacgtccatgatngggttgggccgacgtacccggggatccgcgcggatgggtcatgg
gccgagtacgcgtggggtcacaccggttacctgaccggaaccatcgaacgcacacccgat
ggcattgaaatctctcggcatgagctctgggtggatgccttgggtgagttggctgctgtc
gatggttcggagctgtggtgggataccgccaacccgatccccaccctcaccggtattggc
ggtggacaggttctctcgctgccgggtggtcttaccggtatcggggatgcatggatcgca
ccgggctggcgggccgcccggcccaccgagcagagagatccttgggcagtcatcggtaca
ccgaccgtcccccccatcccggcagcacagccggtgccgccggtagnngggcggcgtctc
gggactggacagcgtgttcctgctggaatcagcctgacgggtaacggtggcctcgacgtt
gcggggttggaatggctcggcgccagggcgtacgaccccgccacgcgtgggttcctttcc
acggacccgctttcacccgttctgggtgcgggctgggacggcaacncctacgcctacgcc
ggcaacaacnccctgaacaccaccgatcccaccgggctgcgcccacttactgacgctgaa
ctgaaagcttacgacgggtccacccgcggcgcgatggcagcagccggggactttatggcc
gacaactgggaatattttgccggcggtgccatggtgatcgctggtggcgtcctgatagcc
accggtgggggaccagcagggatgatgctcatcggcgccggtgccgacaccatcattcag
aaagccaccaccggtgaagttaactggnggcaagttgccttgagtggggctctgggcggt
ttcggtggtgccagcatagccgcccgcgccgggtttaccggcatgaaggcaactgtggtt
gcgggagccagctccggtggtatcagcggtggaattcaggggacgtatggctattacagt
gggccgggaccccacaccatttcgggagcggtaggtgctaccggccaagggctggcgttc
ggaactgtgctcggcggggccggcagtgttgcgggcagttatatcacgcgtggcctgatg
cgaccctga
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