Arthrobacter polaris: J0916_11530
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Entry
J0916_11530 CDS
T08694
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
apoa
Arthrobacter polaris
Pathway
apoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J0916_11530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apoa03400
]
J0916_11530
DNA repair and recombination proteins [BR:
apoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0916_11530
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J0916_11530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
SMC_N
AAA_29
AAA_16
AAA_15
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_18
DUF4350
AAA_30
PRK
Motif
Other DBs
NCBI-ProteinID:
UIK88077
LinkDB
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Position
2823455..2825971
Genome browser
AA seq
838 aa
AA seq
DB search
METFETIVVQPTLSEDSREGFVRVLGARENNLKNVHVDVPRDAIVAFTGISGSGKSSLAF
GTIFAEAQRRYFESVAPYARRLIQQGGNPQVESITGLPPAVALQQRRGTPSTRSSVGTVT
TLSNSLRMLFSRAGEYPDGAAILYSDAFSPNTVTGACPVCHGLGTAHTVSEDSLVPNPEL
SISEGAVAAWPGAWXGXNLRDILVKLGYDVDVPWKDLPHKQRDWILFTEEQPVVTVTPLR
DRIXKPYKGRFWSARSHVMHTLADSXSAPMRERALAFMHSGPCLECGGSGLKRDALAVRV
AGRNIAELNSLPLKEFKDTLGTLATAQAGSEGSREAVGAAIAKDLLHRVEILVDLGLGYL
SLGRGTPTLSPGEMQRLRIATQLRSGLFGVIYVLDEPSAGLHPADTEPLLEVLAQLKAGG
NTVFVVEHNMDLVRRADWIVDVGPQAGDGGGRILYSGPVQGLAQVHESLTRPYLLGGASP
ASPLESLVMDPTAAQDPTHPNMHPRRQACGSLEIAHASLHNLQNLDVYLPLGVLSAVTGV
SGSGKSSLLQVLSEAFDSPDGVEAGAAGTVVRGFETVDRLVEVDQRPIGRTPRSNLATYT
GLFDAVRREFAATDQARKRGFSPSRFSFNVAGGRCENCXGEGSVSVELLFLPGSYGPCPV
CHGARFNEETLEVHYRGKNIAQVLALTVDAAASFLADIPAAARSLATLAEVGLGYLRLGQ
PATELSGGEAQRIKLATELQRARKGHTLYLLDEPTTGLHPSDVRLLLHQLNRLVDSGNTV
VVVEHDMDVVASADWVIDLGPSGGVDGGRLMAAGTPDEVAATEGSRTGPYLAVAAVKR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggagacatttgaaacgatcgttgtccagccaacgctgtccgaagattctcgggagggt
tttgttagggtccttggcgcgagggaaaacaacctcaagaacgttcacgtcgatgtgccc
cgggatgcgatagttgcttttaccggcatttccggcagtggcaaatcatcgttggccttt
ggcaccatctttgctgaggctcagcgccggtatttcgaatctgtggcgccctacgcacgc
cgactgatccaacaaggnggcaatccccaggttgaatccattaccggcctgccgccagcc
gttgctttgcagcaacgtcgcggcactcccagcacacgctcatcagtgggcacagtgacc
acgctgtccaattcattgcgtatgctcttttcccgagccggtgaataccccgacggcgcg
gccatcctttattccgatgcgttctcncccaacaccgtcaccggagcgtgccctgtgtgc
cacggcttgggcacggcgcacacggtgagcgaggactcactcgttccaaacccggagctg
agcatcagcgaaggcgctgtagccgcctggcccggggcctggcangggaanaacctccgc
gacatcctcgtcaaactgggatacgacgtcgacgttccatggaaagaccttccgcacaag
caacgcgactggatcctgttcactgaagaacagccggtcgtcactgtaacgccgctgcgg
gacaggatcganaaaccgtacaagggcaggttctggagtgccagaagccatgtaatgcac
accctggcggactccaanagtgcncccatgcgtgagcgagccttggccttcatgcattcc
gggccctgcctcgagtgcggcggcagcggactcaagcgcgacgcgttggcagtgcgggtt
gcggggcgcaacatcgcggagctgaattctctgccgttgaaggagttcaaggatacactc
ggcactctcgccaccgcccaggccgggtccgaagggtccagggaagctgtgggcgcggcc
atcgccaaggaccttctgcatcgtgtggagatacttgtggacctggggctggggtactta
agcctgggacgcggcactcctacgctttcccctggcgagatgcagcggctgcgcatcgcc
acacaactgcgatcggggctntttggtgtcatctatgtcctggatgagccatcggcaggc
ctgcatccggcagataccgaaccgctgctggaggtcctggcccagctaaaggcaggcggc
aacaccgtctttgtggtggagcacaacatggacttggtgcgccgcgccgactggattgtg
gacgttgggccccaggcaggngacggcggcgggcgcatcctctacagtggcccggttcag
ggtttggctcaggtacacgagtccctcacccgcccctacctgctcggcggtgcctcaccg
gcgtctcccttggaatcacttgttatggatccaacagccgcacaggatcctacgcatccg
aacatgcaccctcgccgccaagcatgtggcagccttgagatcgcgcacgcatcactgcac
aaccttcaaaatctagatgtttacctacccctgggcgttctcagtgcagtgacaggcgtt
tcgggctcgggtaagtcatcattgctgcaggtcctctccgaggcttttgattcncccgat
ggtgtggaagccggtgcggcagggacagtggtccgcgggtttgagacggtggaccggctg
gtagaagttgaccagcgtcccattggccgcacaccacggtccaacctggccacttacaca
ggcttgttcgatgccgttcggcgtgagttcgcagccacggaccaggccagaaagcgtggt
ttcagccctagccgattctctttcaatgtggcaggcgggcggtgtgaaaactgtttnggg
gaaggttcagtgtccgtagagctnttgtttctgcccggcagttacggcccatgccctgtt
tgtcacggcgcacgcttcaacgaggaaactcttgaagttcactaccgtgggaaaaatatt
gcccaggttcttgcattaactgtggatgccgcggcgtcttttctggcggatattccggcc
gcagcccgcagcttggcaacattagcggaggtggggctgggctaccttcggttgggccag
ccggcaaccgaactctccggaggagaagcccaacggatcaaattggccacggaactccaa
cgcgcacgcaagggacacaccctctaccttctggatgagcccaccacaggtctgcacccg
tcggacgtgcgcctgttgttgcaccagctcaaccgtttagtggactccggcaacaccgtg
gtggtggtcgaacatgacatggacgttgtggcatcagctgattgggtgattgatcttggt
ccctccggcggggttgacggcggccgcctcatggcagctggtaccccagatgaggtagcc
gctaccgagggcagccgtaccggaccttatctggccgtggccgccgtcaaacgctag
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