Arthrobacter polaris: J0916_12275
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Entry
J0916_12275 CDS
T08694
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
apoa
Arthrobacter polaris
Pathway
apoa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apoa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J0916_12275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apoa03021
]
J0916_12275
03400 DNA repair and recombination proteins [BR:
apoa03400
]
J0916_12275
Enzymes [BR:
apoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J0916_12275
Transcription machinery [BR:
apoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J0916_12275
DNA repair and recombination proteins [BR:
apoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J0916_12275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
PMD1-like
DUF4407
Motif
Other DBs
NCBI-ProteinID:
UIK88193
LinkDB
All DBs
Position
complement(2984076..2987978)
Genome browser
AA seq
1300 aa
AA seq
DB search
MSSESSFGSMQIGLATAQDIRDWSHGEVKKPETINYRTLKPEXDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAXVTHIWYFKGVPSRLGYLLDL
APKDLEXVIYFAAYMITSVDDEARHAELPNLQIEHDLEKKHMVDTRDSDIATIARNLEGE
IARLEGEGAKAADKKKARDSADRQMANVRKRADADIDRLEQVWDRFKALKVADLEGDEAL
YRELRDRYGMFFEGSMGAEAIKSRLETFDMAGEAEILRDIIANGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERFR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKREGSAGEGR
MFSTAAEAVMAFDAGELHLNSQVKIRLADFIPGAERKGPEGFEAGNSAIIDTSLGQVLFN
DTLPADYPWVEAVADKGQLSEIVNDLAERYXKVVVAATLDNLKDAGFYWATRSGITVAIS
DIEVPAAKPAILESYEVKAAKVQAQYDKGLIADEERRQELIDIWNQATNEIADVMRDSFA
ASNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREDDCGTERGLTLPIAVVDSMGEIVLHE
EVENSVYARTLASEVVDASGKVLAVAGADVGDVLIGELFAAGIEEIKVRSVLTCESTVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSASRGEDITQGLP
XIQELFEARTXKGVAPIAEAAGRINIDESEKTMRLILTPDDGTEEIAYPVLRRARLQVAD
GEHVEVGQKLIVGAVDPKQVLRILGPRAAQKHLVEEVQRVYRSQGVGIHDKHVEVIVRQM
LRRVTVIESGDSKLLPGELAERGRFETENRRVVSEGKKPASGRNELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTNVTVEPTEEAKAN
LFTGPSAFSDFDYVGGVGDLGNEFRAIPLDDYDLGTNFSG
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcagtatgcagattggcctggccaccgcgcaagatatt
cgcgactggagccacggcgaagtcaagaagccggaaaccatcaactaccgcacgctcaag
ccggaanaagacggtcttttctgtgagaagatcttcggcccgtcccgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgttgtggcgta
gaagtcactcgcgcaaaggtacgccgtgagcgcatgggtcacattgagcttgcagccncc
gtcacccacatctggtacttcaagggcgtcccctcgcgcttgggctacctgctggacctt
gcaccgaaggaccttgaanaggtcatttacttcgctgcgtacatgatcaccagtgttgac
gacgaagcacgtcacgccgagctgccgaacctccagattgagcatgatctggaaaagaag
cacatggtggacacacgtgacagcgacatcgccacgatcgcccgcaaccttgaaggcgaa
attgcgcgtcttgaaggtgaaggcgctaaggctgccgataagaagaaggcccgcgattcc
gcggaccgtcagatggcgaacgtgcgcaagcgcgccgacgctgacatcgatcgcctcgag
caggtttgggatcgcttcaaggctctgaaggttgctgaccttgaaggcgacgaggccctg
taccgtgaattgcgtgaccgttacggcatgttcttcgaaggttccatgggtgctgaagct
atcaagagccgtcttgagacctttgacatggccggtgaagcggagatccttcgcgacatc
atcgctaatggcaagggccagcgcaagacccgtgccctcaagcgcttgaaggttgtcaac
gctttcttgacaaccaacaacagcccgcttggcatggtccttgacgccgtgccggtgatc
ccgccggaactgcgccccatggttcagctcgacggtggccgtttcgccacctcggacttg
aacgatctttaccgccgcgtgatcaaccgcaacaaccggctcaagcgtttgcttgatctg
ggtgctccggagatcatcgtcaacaacgaaaagcgcatgctccaggaagctgttgattcg
ctcttcgataacggtcgtcgtggccgccccgtcaccgggccgggcaaccgaccgttgaag
tcgctctctgacatgctcaagggcaagcagggtcgattccgtcagaacctcctcggcaag
cgtgttgactactccggccgttcggtcattgttgttggtccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggcattggagctcttcaagccgttcgtgatgaagcgcttg
gttgacctcaaccatgctcagaacatcaagagcgccaagcgcatggtggagcgtttccgt
ccccaggtgtgggatgttcttgaagagatcatcaccgagcacccggtactgctgaaccgt
gcaccaaccctgcaccgtttgggtattcaggcgttcgaaccgcagcttgttgaaggtaaa
gccatccagcttcacccgttggtttgtggtgctttcaacgctgacttcgacggcgaccag
atggcagttcacttgccgttgagccccgaagcgcaggctgaagcccgcatcttgatgctg
tcctccaacaacatcttgaagccttcagatggccgtccggtgactttgccgtcacaggat
atgatcatcggtctgtaccacttgaccaccaagcgcgagggttcagccggcgaaggccgt
atgttctccaccgcggctgaggctgtcatggcgttcgacgccggtgagctgcacttgaac
tcacaggtcaagatccgtttggctgacttcattcccggcgccgaacgtaagggtccggaa
ggtttcgaagctggcaattctgccatcatcgacacttccctgggccaggtgctcttcaac
gacactttgccagctgactacccgtgggttgaagcagtggcagataagggccagctctct
gagatcgtcaacgatcttgctgagcgctacnccaaggtggttgtggcagcaacactggat
aacttgaaggatgccggtttctactgggcaacccgttcgggtattacagttgccatctcc
gacattgaggtccctgccgcgaagcccgccatcttggagagctacgaggtcaaggctgcc
aaggtccaggcccagtacgacaagggtttgattgctgacgaggagcgccgccaggagctt
atcgacatctggaaccaggcgaccaacgagatcgccgatgttatgcgtgactcgttcgct
gcatccaacacgatcaaccgtatggtttcctccggtgcccgtggtaactggatgcaggtt
cgccagattgccggtattcgtggcttggtggctaaccctaagggtgaaattattcctcgc
ccgatcaagtcttcctaccgtgaaggcctgtcggttttggagtacttcattgctactcac
ggtgctcgtaagggtctggctgatacggctctgcgtacggctaactccggttacctcacg
cgccgtctggtcgatgtgtcccaggatgtcatcgttcgcgaagacgactgtggcaccgag
cgcggcttgaccctgccgatcgccgtggttgattccatgggcgaaatcgtgctgcacgag
gaagtcgagaacagcgtttacgcccgtaccttggcttctgaggtagtggatgccagcggt
aaggtgctagctgttgctggcgccgatgttggagacgtactgatcggtgaactctttgcc
gctggtatcgaagagatcaaggtccgttcagtgctcacctgtgagtcaactgttggaact
tgcgcactttgctacggccgttccttggctacgggtaagaccgtggacattggtgaagcc
gtcggtatcattgcggctcagtccattggtgagcccggtacccagctgaccatgcgtact
ttccacaccggtggtgctgtttctgccagccgtggcgaggacatcacccagggtctgccc
ngtatccaggagctcttcgaagcacgtaccnccaagggtgtggctccgatcgcagaggct
gccggtcgcatcaacattgatgagtccgagaagacgatgcgtttgatcctcacaccggat
gacggtaccgaagagatcgcttacccggttctgcgacgagcacgcctgcaggttgctgac
ggtgagcatgttgaagttggccagaagctgattgtgggtgcggttgaccccaagcaggtt
ctgcgtattcttggcccgcgtgccgctcagaagcacctcgtagaggaagttcagcgcgtt
taccgcagccagggtgtgggtatccacgacaagcacgtcgaggttatcgtccgtcagatg
ctccgccgcgtcacagtcatcgagtccggcgactcgaagctgctaccgggcgagcttgcc
gagcgcggccgcttcgagacggaaaaccgtcgcgtcgtgtccgaaggcaagaagccggca
tcagggcgtaacgagctgatgggtatcaccaaggcttccttggcgaccgagtcatggctc
tccgctgcttccttccaggaaaccacccgcgttctgacgcaggcggccatggaaggcaaa
tcggatccgttgttgggtctgaaggagaacgtgatcatcggtaagttgatccccgccggc
accggccttccgcgctacaccaacgtcacggtggagcccacggaagaagccaaggccaac
ctgttcaccggtccgagcgcattcagcgacttcgactatgtgggcggcgtaggagatctg
ggcaacgagttccgtgccatccccttggatgactacgatctcggtaccaacttctccggc
tga
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