Arcobacter porcinus: APORC_0236
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Entry
APORC_0236 CDS
T06395
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
apoc
Arcobacter porcinus
Brite
KEGG Orthology (KO) [BR:
apoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apoc03009
]
APORC_0236
Enzymes [BR:
apoc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
APORC_0236
Ribosome biogenesis [BR:
apoc03009
]
Prokaryotic type
ribosomal protein modification factors
APORC_0236
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
RE_Alw26IDE
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEP39869
UniProt:
A0A1C0AX01
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Position
complement(208648..209988)
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AA seq
446 aa
AA seq
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MKFTEEKPKKKLHLVSLGCTKNLVDSEVMLGKLRDYELTDDQTQADLIIVNTCGFIDSAK
EESINTTLNLHNDRKKESVLVMAGCLSERYKDDLQKELKEIDIFTGVGDYDKIDKLVNEK
RSKFSNEVFLANDDNDRVITGSNYHAYVKLSEGCNQACSFCAIPSFKGKLHSRTLQSLVK
EVKNLVSKGFKDFSFVSQDSSSFLRDLGINDGLEQLISEVEKIEGVKTARILYLYPSTTT
LSLIDKIADSKVFVNYFDMPLQHISQSMLKIMKRGKGSEKLRELVDYMKSKPNSFVRTTF
IAGHPGENENDFEELCKYVESFGFDRANVFSYSDEEGTNAETREDKIDQELIDERASILG
EIIYETTLKSLENDIGKTFEVYIDGESDEHEYLLSARKTLWAPEIDGEIYINDNEDNLEI
KYGEIYEVEATQIAGDKLLAKIIRKV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttactgaagaaaaacctaaaaaaaagcttcatttagtaagccttggctgtaca
aaaaacttagttgatagtgaagttatgttaggaaaactaagagattatgaattaacagat
gatcaaacacaagctgatttaatcattgtaaacacttgtggttttattgatagtgcaaaa
gaagagagtataaatacaactttaaatcttcataatgatagaaaaaaagagtctgtttta
gttatggctggatgcttaagtgaaagatataaagatgatttacaaaaagagctaaaagag
attgatatttttacaggtgttggtgattatgacaaaattgataaacttgtaaatgaaaaa
agatctaaattttcaaatgaagttttccttgcaaatgatgataatgatagagttattaca
ggttcaaactatcatgcttatgtaaagttaagcgaaggctgtaatcaagcatgttctttt
tgtgcaattccatcttttaaaggaaagcttcattcaagaactctacaatcattggtaaaa
gaggttaaaaatttagtctcaaaaggatttaaagacttttcatttgtctctcaagattca
tcatcatttttaagagatttaggaataaatgatggtttagaacaacttatttctgaagtt
gaaaaaatagaaggtgtaaaaacagctagaattttatatctatatccaagcactacaact
ctatcattaattgataaaatcgcagattcaaaagtatttgtaaactattttgatatgcca
cttcaacatatttctcaatctatgttaaaaattatgaaaagaggaaaaggaagcgaaaaa
ttaagagagcttgtagattatatgaaatcaaaaccaaactcatttgtaagaacaactttt
atagctggacatccaggggaaaatgaaaatgattttgaagaactttgtaagtatgtagag
agttttggttttgatagagcaaatgttttttcatactctgatgaagagggaacgaatgca
gaaactagagaagataaaatagatcaagaacttatagatgaaagagcttctattttagga
gagattatttacgaaacaactttaaaatcattagaaaatgatattgggaaaacttttgaa
gtttatattgatggagagagtgatgaacacgaatatcttttaagtgctagaaaaactctt
tgggctcctgaaattgatggtgaaatatatataaatgataatgaagataatttagagata
aaatatggtgaaatatatgaagttgaagccactcaaattgcaggagataaactcttagca
aaaattattagaaaagtatga
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