Arcobacter porcinus: APORC_0403
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Entry
APORC_0403 CDS
T06395
Symbol
dnaQ1
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apoc
Arcobacter porcinus
Pathway
apoc03030
DNA replication
apoc03430
Mismatch repair
apoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APORC_0403 (dnaQ1)
03430 Mismatch repair
APORC_0403 (dnaQ1)
03440 Homologous recombination
APORC_0403 (dnaQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apoc03032
]
APORC_0403 (dnaQ1)
03400 DNA repair and recombination proteins [BR:
apoc03400
]
APORC_0403 (dnaQ1)
Enzymes [BR:
apoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APORC_0403 (dnaQ1)
DNA replication proteins [BR:
apoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APORC_0403 (dnaQ1)
DNA repair and recombination proteins [BR:
apoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APORC_0403 (dnaQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Pox_C7_F8A
Motif
Other DBs
NCBI-ProteinID:
QEP40033
UniProt:
A0A5C2HAT1
LinkDB
All DBs
Position
complement(373861..374484)
Genome browser
AA seq
207 aa
AA seq
DB search
MFNSIKNNFYKHKLKNKEFNFLFDKPISDEYVCFDCETTGLDPSIDDIISIGAVIIKDNT
IIASEKFIRYVKPKSNQLNEHSIKIHHLRECDLENACQIEDVILDFVNFIGNRKIVGYFL
DFDLKMINKYLKPLIGINLPNKKYEVSEIYHDFKIDLIPQSFVDLRFKSILEELDLPNFG
THDSYNDALMTALIFIKLKNCANVKIN
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattcaatcaaaaataacttctacaaacataaattaaaaaataaagaatttaat
ttcttatttgataaaccaataagtgatgaatatgtttgctttgattgtgaaacaacagga
ttagatccttcaattgatgatattatctctattggtgcagtaatcataaaagataacact
attattgcaagtgaaaaattcataagatatgtaaaaccaaaatcaaatcaactaaatgag
cattctataaaaattcatcacttaagagagtgcgatttagaaaatgcttgtcaaatagaa
gatgtgattttagattttgtaaattttattggaaatagaaaaattgtaggatatttttta
gattttgatttgaaaatgataaataaatatttaaaacctcttattggtataaatttacca
aacaagaagtatgaagtttcagaaatttatcacgattttaaaattgatttaattccacaa
agttttgttgatttaagatttaaatcaattctagaagagctagacctaccaaattttgga
actcatgactcatacaatgatgcactaatgacagctttaatttttataaaattaaaaaat
tgtgctaatgtaaaaattaattaa
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