Arcobacter porcinus: APORC_0512
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Entry
APORC_0512 CDS
T06395
Name
(GenBank) RND family efflux system, membrane fusion protein
KO
K02005
HlyD family secretion protein
Organism
apoc
Arcobacter porcinus
Brite
KEGG Orthology (KO) [BR:
apoc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
APORC_0512
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GFIT
Motif
Pfam:
Beta-barrel_YknX
BSH_RND
Beta-barrel_RND_2
BSH_YknX
BSH_CzcB
Beta-barrel_RND
Biotin_lipoyl
HH_MFP_RND
YknX_C
Beta-barrel_AprE
LcnD_C
Motif
Other DBs
NCBI-ProteinID:
QEP40129
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Position
complement(481215..482465)
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AA seq
416 aa
AA seq
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MNNSLLKDLNSYKGGKKSYKYWILSIVIIFIALMVYIFLPQNDDLQPKYNTQKAQIGDLK
VIVSASGNLSPTNSVEIGIEVSGTIKEIFVDYNDEVTVGQVLAKIDTTKLEASVESSRAS
LAISKANLNESEVNLKNKKLIFDRTKKMFDSSGGKFPSQNEYDDTQFAYEVALASVKASK
AKVLQSESDLKNNLQNLDKASVKSSINGIVLNREVEVGQTLAATMSAPKLFTLAKDLSNM
DLIVNIDEADVADIKDGLDVFFTVDAYSNKEFKGKIKQVRLNPITTNGVVTYETVVSVKN
DDLLLKPGMTANAKIVTKNLENQLLVPNSAFRFKPVVQVDKKAPNLGAPSRFRPSSKNES
SKSNDGMMSLYILENGEAKEIKVKIISSNTQQTAVSSKSLKQDDEIITSMKSQNAK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaataatagtttactaaaagatttgaatagctacaaaggtggtaaaaaatcttataaa
tattggattttatctattgttattatttttattgctttgatggtttatatttttttacca
caaaatgatgatttacaaccaaaatataatactcaaaaagcacaaattggggatttaaaa
gtaattgttagtgcaagtggaaacctaagtcctacaaatagtgttgagattggaattgaa
gtttctggaacaattaaagagatttttgtagattacaatgatgaagtaacagttggtcaa
gttttagcaaaaattgatactacaaaacttgaagcaagtgttgaaagctcaagagcgagt
ttggctatttcaaaagcaaatctaaatgagagtgaagtaaatcttaaaaataagaagctg
atttttgatagaacaaaaaagatgtttgatagttcaggtggaaaatttccatctcaaaat
gagtatgatgatacacaatttgcttatgaagtagcacttgcttctgttaaagcttcaaaa
gcaaaagttttacaatctgaatctgatttaaaaaataatcttcaaaatttagataaagca
agtgtaaaatcaagtataaatggaattgtgttaaatagagaagttgaagttggtcaaact
ttagcagcaacaatgtcagcaccaaaactttttactcttgctaaagatttatcaaatatg
gatttaatagtaaatattgatgaagcagatgttgctgatattaaagatggcttagatgta
ttttttacagttgatgcatattctaataaagagttcaaaggaaaaattaaacaagtaaga
ttaaatcctattacaacaaatggagttgtaacttatgaaactgttgtaagtgtaaaaaat
gatgatttacttttaaaacctggaatgactgcaaatgcaaaaattgttacaaaaaatctt
gaaaaccagcttttagtcccaaatagtgcttttagatttaaacctgtggttcaagtggat
aaaaaagcacctaatcttggagctccatcaagatttagaccaagttcaaaaaatgaatct
tctaaatcaaatgatgggatgatgagcttatatattttagaaaatggtgaagcaaaagag
ataaaagtaaaaataatttctagtaatactcagcaaacagctgtatcttcgaaaagttta
aaacaagatgatgaaataattacttcaatgaagagccaaaatgcaaaatag
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