Arcobacter porcinus: APORC_0593
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Entry
APORC_0593 CDS
T06395
Symbol
rlpA
Name
(GenBank) septal ring lytic transglycosylase
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
apoc
Arcobacter porcinus
Brite
KEGG Orthology (KO) [BR:
apoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apoc01011
]
APORC_0593 (rlpA)
Enzymes [BR:
apoc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
APORC_0593 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
apoc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
APORC_0593 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
VirB3
DUF5776
Motif
Other DBs
NCBI-ProteinID:
QEP40209
UniProt:
A0A1C0B0Y9
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All DBs
Position
562628..563476
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AA seq
282 aa
AA seq
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MYFFKTYKKTILLALLMSLLLSSCSKSRNVNYGSYNKTTSSKNISNSDAMHRATLRPYVV
MGVRYHPFVPNLNDKYVGVASWYGPDFHAKKTSNGEIYNMYDMTAAHKTLPMNTVVKVEN
LENGKSVIVRINDRGPFVKDRIIDLSNKAAHGIDMVKKGTAKVRVTVLGFNGKVGDRNAP
NPDFSKGYIPPAKKGVDYVEPKSVSNSQIKSSGNVKLQVGAFSLVEGAITTQENYQNRFS
NKKVEYIENGGIYRVYIKGFKNRNEAENFKNSNSLNNAVIIE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtatttttttaaaacttataaaaaaacaatacttttagctctattaatgtcattatta
ttaagttcttgtagtaaatcaagaaatgttaattatggttcatataataaaacaacaagt
agtaaaaatattagcaatagcgatgcaatgcatagagcaactcttaggccttatgttgtt
atgggagttagataccatccatttgttccaaatttaaatgataaatatgtaggtgttgct
tcttggtatggaccagactttcatgcaaaaaagacatcaaatggtgaaatatataatatg
tatgatatgacagcggctcataaaactcttcctatgaatacagttgtaaaggttgaaaac
cttgaaaatggtaaaagtgtaattgtaagaataaatgatagaggaccatttgtaaaagat
agaattatagatttatcgaataaagcagctcatggaattgatatggtaaaaaaaggtaca
gcaaaagttagagtaactgttttaggatttaatggtaaagtaggagacagaaatgctcca
aatccagattttagtaaaggatatattccaccagccaaaaaaggtgttgattatgtggaa
ccaaagagtgtttctaattctcaaataaaaagtagtggaaatgttaaattgcaagttggt
gcatttagtttagtagaaggtgcaataactacacaagaaaattatcaaaatagattctca
aataaaaaagtagaatatattgaaaatggtggaatttatagagtatatattaaaggcttt
aaaaatagaaatgaagctgaaaactttaaaaattctaactctttaaataatgcagtaatt
attgaataa
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