Arcobacter porcinus: APORC_0959
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Entry
APORC_0959 CDS
T06395
Name
(GenBank) DEDDh 3'-5' exonuclease domain family protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
apoc
Arcobacter porcinus
Pathway
apoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
APORC_0959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apoc03400
]
APORC_0959
DNA repair and recombination proteins [BR:
apoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
APORC_0959
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
DNA_pol_A_exo1
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
QEP40561
UniProt:
A0A5C2HGX7
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All DBs
Position
921157..921897
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AA seq
246 aa
AA seq
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MVYYILFDTETTGALEEDRVIQFGGMILDQKGKMEVYDELCSSSIPIKLEAMEVHNITPD
MLENKPRAIETNFYRRLEELNSSSNFLIAHNINFDLEMIKKEGFVNNLQLIDTLRCARHL
YPELPYHRLQYLRYALNLYKSEKEEANKLNITIKAHDAIGDVLVMKLFLRELVAKTREVY
PNDNPMKKLVALSSTPVFVQTFKFGKYKGENISDVAQKDANYLNWMLNNMEDMDEDLKYT
LSKVLQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggtttattatattttatttgatacagaaacaacaggagctttggaagaggatagagtt
attcaatttggtggaatgattttagatcaaaaagggaaaatggaagtttatgatgaactt
tgctcaagttctattccaataaaacttgaagctatggaagtacataatattactcctgat
atgctagaaaacaaaccaagagctatagaaacaaacttttatagaagattagaagagtta
aatagtagttcaaactttttaattgcacataatataaattttgatttagagatgataaaa
aaagagggatttgtaaataatctacaattaatagatactttaagatgtgctaggcattta
tatcctgaactgccttatcatagacttcaatatttaagatatgctttaaatctttataaa
agtgaaaaagaggaagcaaataaactaaatatcactataaaagctcacgatgcaataggt
gatgtacttgttatgaaactttttttaagagaacttgtagcaaaaacaagagaagtttat
ccaaatgataatcctatgaaaaaacttgtagctttaagctctacacctgtatttgtacaa
acatttaagtttggtaaatataaaggagaaaatatatctgatgttgcacaaaaagatgca
aactacttaaactggatgcttaataatatggaagatatggatgaagatttgaaatatact
ttgagtaaggttttacaataa
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