Ancylobacter polymorphus: K9D25_07270
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Entry
K9D25_07270 CDS
T08152
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
apol
Ancylobacter polymorphus
Pathway
apol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K9D25_07270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apol03019
]
K9D25_07270
Enzymes [BR:
apol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K9D25_07270
Messenger RNA biogenesis [BR:
apol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K9D25_07270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UOK72494
UniProt:
A0A9E6ZVJ4
LinkDB
All DBs
Position
complement(1551787..1553220)
Genome browser
AA seq
477 aa
AA seq
DB search
MKERYLTTFNELGLAEPILKALAEANHTTPTPIQIQAVPQVLAGRDLIGIAQTGTGKTAA
FALPILQHLVTHRFRPERRSARALVLSPTRELSGQILESFRLYGKHVRPSTALAIGGVPI
GRQARALANGVDVLVATPGRLVDLLENNAVRLDMVEVLVLDEADQMLDMGFIHAIRAICA
RLPAKRRNLFFSATMPREIEKLADSLLTDPVRVAVTPVAKTADRIEQKVFFTDRAGKPNL
LVEVLSEPDLDRALVFSRTKHGADRVVKGLAGAGIAAEAIHGNKSQPQRERALAAFRQGV
VKVLVATDIAARGIDVPGVSHVINYDLPNVPESYVHRIGRTARAGREGIAISLCDGEERA
FLRDIERLIKITIPSVDRRGESRREGAPRLEGFRSDGPRPAREERGPRGPRSDAPRGARP
FNRGPRPEGEARKDGPRHDRPHHDGPRHEGRTDGVRREGPPREGRRPPRRKAYNAAP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacgctacttgaccactttcaacgaactcggccttgccgagccgatcctgaag
gccctcgcggaagccaaccacaccacgcccaccccgatccagattcaggctgtgccgcag
gttctcgcgggccgcgatctcatcggcatcgcccagaccggcaccggcaagaccgccgcc
ttcgcgctgccgatcctgcagcacctcgtcacccaccgcttccgtcccgagcgccgctcg
gcccgcgcgctggtgctgagcccgacccgcgaactctccggccagatccttgagagcttc
cgcctctatggcaagcatgtgcgcccctccaccgcgctcgccatcggcggcgtgccgatc
ggccgccaggcccgcgcgctcgccaatggcgtcgacgtgctggtggcgacccccggccgc
ctcgtcgacctccttgagaacaacgcggtccggctcgacatggtcgaggtgctcgtgctc
gacgaggccgaccagatgctggacatgggcttcatccatgccattcgcgccatctgcgcc
cggctgccggccaagcgccgcaacctgttcttctccgccaccatgccgcgcgagatcgag
aagctggcggattcgctgctgaccgatccggtgcgcgtcgcggtgacgccggtcgccaag
accgccgaccgcatcgagcagaaggtgttcttcaccgaccgcgccggcaagccgaacctg
ctggtcgaagtgctctccgagcccgatcttgatcgcgccctcgtgttctcgcgcaccaag
catggcgctgaccgcgtggtgaagggccttgccggggccggcatcgccgccgaggcgatc
catggcaacaagtcgcagccgcagcgtgagcgggcgctcgcggccttccgccagggtgtc
gtcaaggtgctggtcgccaccgacatcgccgcgcgcggcatcgacgtgccgggcgtcagc
catgtgatcaattacgacctgcccaatgtgccggaaagctatgtccatcgcatcggccgc
accgcgcgcgccggccgcgagggcatcgccatttcgctgtgcgacggcgaggagcgcgct
ttcctgcgcgacatcgagcggctgatcaagatcaccatcccctcggtcgaccgccgcggc
gaaagccgccgcgaaggcgcgccgcgcctggaaggcttccgctccgatggcccgcgcccg
gcgcgcgaggaacgcgggccgcgtggcccgcgcagtgacgccccgcgtggcgcccgcccg
ttcaaccgtgggccccgtcccgagggcgaggcccgcaaggacggtccgcgccatgaccgg
ccgcaccatgacggcccgcgccacgaaggccgcaccgatggcgtccgccgcgagggtccg
ccgcgcgaggggcgccgcccgccgcgccgcaaggcctataacgccgcgccctga
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