KEGG   Ancylobacter polymorphus: K9D25_11585
Entry
K9D25_11585       CDS       T08152                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
apol  Ancylobacter polymorphus
Brite
KEGG Orthology (KO) [BR:apol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apol03021]
    K9D25_11585 (rpoH)
Transcription machinery [BR:apol03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     K9D25_11585 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_3 Sigma70_r4_2 HTH_11 KORA HTH_19 HTH_Crp_2 GntR NirdL-like_HTH HTH_7 PgaD HTH_20 HTH_28 UCR_14kD DUF3431
Other DBs
NCBI-ProteinID: UOK69402
UniProt: A0A9E6ZSN0
LinkDB
Position
2460422..2461333
AA seq 303 aa
MARSAMSLPSAEGGLSRYLAEIRRFPMLEPQEEYMLAKRWREHEDPDAAHRLVTSHLRLV
AKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPDKGFRLATYAMWWIKASIQEYILRSW
SLVKMGTTAAQKKLFFNLRKAKSQISALEEGDLRPDQVQQIATKLGVTEQEVIEMNRRLG
GDASLNSPLRGDVEGGGEWQDWLADDRDSQESVLVEHEEMDNRRSALSGALSVLNERERR
IFEARRLSDDPMTLEDLAAEFGVSRERVRQIEVRAFEKVQKAVIDRVHQMETAPMRQDHS
PAM
NT seq 912 nt   +upstreamnt  +downstreamnt
atggcccgttccgctatgagcctaccgtccgccgaaggtggcctgagccgctacctcgcg
gaaatccgccggttcccgatgctggagccgcaggaagaatatatgctcgccaagcgctgg
cgcgagcatgaggatcccgacgccgcgcatcgtctcgtcaccagccatctgcggctcgtg
gccaagatcgccatgggctatcgcggctacggcctgccgatctccgaggtgatctcggag
ggcaatgtcggcctgatgcaggcggtgaagcgcttcgagccggacaagggcttccgcctt
gccacctatgccatgtggtggatcaaggcctcgatccaggagtacatcctgcgctcgtgg
agcctggtgaagatgggcaccacggcggcgcagaagaagcttttcttcaacctgcgtaaa
gcaaagagccagatttcggcgctggaagagggggatcttcgtcccgaccaggtgcagcag
atcgcgaccaagctcggcgttaccgagcaggaagtgatcgaaatgaaccgtcgtcttggc
ggagacgcgtctctgaactcgcctcttcgcggagatgtcgaggggggcggggagtggcag
gactggctggcggatgatcgcgacagtcaggagtccgttctcgtcgagcatgaggagatg
gacaaccgccgcagcgcactctcgggcgcgctttccgtgctcaatgagcgcgagcggcgc
atcttcgaggcgcggcggctgtccgacgacccgatgacgctggaagacctcgccgccgag
ttcggcgtgtcgcgcgagcgtgtgcggcagatcgaggtgcgcgccttcgagaaggtgcag
aaggcggtcatcgaccgcgtgcaccagatggagacggcgccgatgcggcaggatcattcc
cccgccatgtga

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