Ancylobacter polymorphus: K9D25_13180
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Entry
K9D25_13180 CDS
T08152
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
apol
Ancylobacter polymorphus
Pathway
apol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
apol00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K9D25_13180 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apol03021
]
K9D25_13180 (rpoD)
Transcription machinery [BR:
apol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9D25_13180 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_DsbA
Motif
Other DBs
NCBI-ProteinID:
UOK69704
UniProt:
A0A9E6ZQ67
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All DBs
Position
2786815..2788815
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AA seq
666 aa
AA seq
DB search
MAKQAAEATEAPEKDGDTPDSPLLDLSDAGVRKMIKLAKKRGYVTYDELNEVLPSEQNTS
DQIEDIYAMLNEMGINVVEAEEAEAEAEGEEAPAEAAEEEEESGGELAETGSRTVIRSET
KSEPGERTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQAIII
WRDELVEGKVLLRDIIDLEATYAGPEAKNGPIVEGGSLAPEAEEEREPTIGETIAGDDDD
DMENSLSLAAMEAEIKPKVLETFDRIADAYKKLRRLQDQNVESKLKNESLSPSQDRKYKS
LKDALILDVKSLSLNQARIDNLVEQLYDINKRLVSLEGRLMRLAESFGVSREDFLRQYQG
SELDPKWVARVKNLTSRGWKGFVGQELDGIKDLRSEIHALATETGLEIQEFRKIVQMVQK
GEKEARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKF
STYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKL
GMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRV
LASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKL
RSFLDN
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaggcagcggaagcgacggaagcccccgagaaggacggcgacaccccggac
agcccgttgctggacctttcggacgctggcgtccggaagatgatcaagctcgccaagaag
cgcggttacgtgacgtatgacgagctgaacgaggttctcccctccgagcagaacacctcc
gaccagatcgaagacatttacgccatgctcaacgagatgggcatcaatgtcgtcgaggcg
gaagaggcggaagccgaggccgaaggtgaggaagccccggccgaggcggcggaggaagag
gaagagagcggcggcgaactggccgagaccggctcgcgcaccgtcatccgctcggagacg
aagtccgagccgggcgagcgcaccgacgaccccgtgcgcatgtatctgcgcgagatgggc
tcggtcgagttgctgtcgcgcgagggcgaaatcgccatcgccaagcgcatcgaggccggc
cgcgaggcgatgatcgccggcctgtgcgaaagcccgctgaccttccaggccatcatcatc
tggcgcgacgaactcgtcgaaggcaaggtgctgctgcgcgacatcatcgaccttgaggcc
acctatgccgggcccgaggcgaagaacggccccatcgtcgagggcggctcgctcgccccc
gaggcggaggaggagcgtgagccgaccatcggcgagaccatcgccggcgatgatgatgac
gacatggagaactccctgtcgctggcggcgatggaagcggagatcaagccgaaggtgctg
gaaaccttcgaccgcatcgccgacgcctataagaagctgcgccgtcttcaggaccagaac
gtcgagtccaagctgaagaacgagagcctctcgccctcgcaggaccgcaagtacaagagc
ctgaaggacgcgctgatcctcgacgtgaagtcgctgtcgctgaaccaggcgcgcatcgac
aatctcgtcgagcagctctacgacatcaacaagcgcctcgtctcgctggaaggccggctg
atgcggctcgccgagagcttcggcgtctcgcgcgaggacttcctgcgccagtatcagggt
tccgagctcgacccgaaatgggtcgcccgggtgaagaacctgacctcgcgcggctggaag
ggttttgtcgggcaggaactcgacggcatcaaggatctgcgctcggaaatccacgccctc
gccaccgagacggggctagagatccaggaattccgcaagatcgtgcagatggtgcagaag
ggcgaaaaggaagcccggcaggcgaagaaggaaatggtggaggccaatctgcgcctcgtc
atctccatcgccaagaagtacacgaaccgcggcctgcagttcctcgacctcattcaggaa
ggcaatatcggcctgatgaaggcggtcgacaagttcgagtaccgccgcggctacaagttc
tcgacctatgccacctggtggatccggcaggcgatcacccgctcgatcgccgaccaggcc
cgcaccatccgcatcccggtgcacatgatcgagacgatcaacaagatcgtccgcacctcg
cgccagatgctgcacgagatcggccgcgagccgaccccggaggaactggccgaaaagctc
ggcatgccgctggagaaggtgcgcaaggtgctgaagatcgccaaggagccgatctcgctg
gagacgcccatcggcgacgaggaagacagccatctcggcgacttcatcgaggacaagaac
gccatcctgccgatcgacgcggcgatccagtccaatctgcgcgagacgaccacgcgcgtg
ctggcctcgctcaccccgcgtgaggagcgcgtgctgcgcatgcgcttcggcatcggcatg
aacaccgaccacacgctggaagaagtcggccagcagttctcggtgacgcgcgagcgtatc
cgtcagatcgaggcgaaggcgctgcgcaagctcaagcacccctcgcgctcgcgcaagctg
cgcagcttcctcgacaattga
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