Ancylobacter polymorphus: K9D25_17685
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Entry
K9D25_17685 CDS
T08152
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
apol
Ancylobacter polymorphus
Pathway
apol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K9D25_17685 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apol03021
]
K9D25_17685 (rpoC)
03400 DNA repair and recombination proteins [BR:
apol03400
]
K9D25_17685 (rpoC)
Enzymes [BR:
apol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K9D25_17685 (rpoC)
Transcription machinery [BR:
apol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K9D25_17685 (rpoC)
DNA repair and recombination proteins [BR:
apol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K9D25_17685 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
T4_gp9_10_N
Motif
Other DBs
NCBI-ProteinID:
UOK70538
UniProt:
A0A9E7CV17
LinkDB
All DBs
Position
complement(3674410..3678600)
Genome browser
AA seq
1396 aa
AA seq
DB search
MNQEVMNLFNPAAPAPTFDQIKISIASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYCVIEPGLTPLKERQLLSEEDYLRAQEEYGDDSFTA
LIGAEAIREILRGMDLEKIAGNLRKEIAEATTELKPKKLAKRLKIVEAFQESGNKPEWMI
LTHVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYSRLDAKGLSATVKQAKKLVEKERPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSIEAQL
EARVLMMSTNNILHPANGAPIIVPSQDIVLGLYYLTMMREGEPGEGMAFANMGEIDHALA
AKAITLHTKVRGRYIGVDEDGNPAPKIYETTPGRMKLGELLPKNPKTPFDVVNKLMTKKE
ISNMIDTVYRHCGQKETVIFCDRIMTLGFSNAFRAGISFGKDDMVVPSKKWDMVEETRAL
TKEYEQQYNDGLITQGEKYNKVVDAWGKCSARLADEMMAEISAVKKDPVTGREKQINSIY
MMAHSGARGSREQMRQLAAMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDSIITLRDCGTTNGIAMRAIIDAGNIVATLGSRVLGRT
AAEDVIEGATGNVIVPAGHMMDEADVERIAKAGVQEIKIRSVLTCEAKNGVCGTCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLSEQSFIEASFEGTVKIRNRN
VVRNSDGELIAMSRNLSVLIVDHDGTEKASHRIQFGAKLKVDEGDAIKRGQRIAEWDPYT
RPILTEVEGIVGYEDLVEGASLSETVDESTGIAKRVVTDWRTGRGSELRPSLVVKGADGK
VLKLQRGGDARYTLPVDAILSADPGSTIKAGDVLARVPMESAKTRDITGGLPRVAELFEA
RRPKDAAIIAEISGTIRFGKDYKNKRRVSIEPQDSNDETAEYLIPKGKHIHLQDGDLVEK
GDFIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEI
DDAGESDLLTNEQIDASELNEINERLIAEGKKPASGHPVLLGITKASLQTRSFISAASFQ
ETTRVLTEAAVNGKSDDLAGLKENVIVGRLIPAGTGAQMAKLRVTATTRDDLIAAQNEQD
SVASNAPRLEGPAAAE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaggtcatgaatctcttcaacccggcggcgccggcgccgactttcgatcag
atcaagatctcgatcgcgagtccggagaagatcctgtcgtggtccttcggcgagatcaag
aagcccgaaaccatcaactaccgcacgttcaagcctgagcgtgacggcttgttctgcgcg
cgcatcttcggtccgatcaaggactatgagtgcctgtgcggcaagtacaagcgcatgaag
tacaaggggatcatctgcgagaagtgcggcgtggaagtcacgctgtcgcgcgtgcgccgt
gagcgcatgggccacatcgagcttgccgcccccgtcgcgcatatctggttcctgaagtcg
ctgccgagccgcatcggccttctgctcgatatgacgctgaaggacctcgagcgcatcctt
tacttcgagtactactgcgtcatcgagccgggcctcaccccgctgaaggagcgtcagctc
ctctcggaagaggactatctgcgcgcgcaggaagagtatggcgacgactcgttcaccgcg
ctgatcggcgcggaggcgatccgcgagattctgcgtggcatggatctggagaagatcgcc
ggcaatctgcgcaaggagatcgccgaggccaccaccgagctgaagccgaagaagctggcc
aagcgccttaagatcgtcgaagccttccaggaatccggcaacaagccggagtggatgatc
ctgacgcatgtgccggtcatcccgccggacctgcgcccgctcgtcccgctggacggtggc
cgcttcgcgacctccgaccttaacgacctctaccgccgcgtcatcaaccgcaacaaccgt
ctcaagcggctgatcgagctgaaggctccggacatcatcatccgcaacgagaagcgcatg
cttcaggaagcggtcgatgcgctgttcgataacggccgtcgcggccgcgtcatcaccggt
gccaataagcgcccgctgaagtcgctcgccgacatgctgaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtgatcgtcgtcggc
cccgagctgaagctgcaccagtgcggcctgccgaagaagatggcgctggagctgttcaag
cccttcatctattcgcgtctcgacgccaagggcctgtccgcgaccgtgaagcaagcgaag
aagctggtcgagaaggagcgtcccgaggtgtgggacatcctcgacgaggtgatccgcgag
catcccgtgatgctgaaccgcgcgccgacgctgcatcgcctgggcatccaggcgtttgag
ccggtgctgatcgaaggcaaggcgatccagctgcacccgctggtctgctcggccttcaac
gcggacttcgacggcgaccagatggcggtgcacgtgcccctgtccatcgaggcgcagctg
gaagcgcgcgtgctgatgatgtcgaccaacaacatcctgcaccccgccaacggcgcgccg
atcatcgtgccgtcgcaggacatcgttctcggcctctattatctcaccatgatgcgcgag
ggtgagcccggcgagggcatggccttcgccaacatgggcgagatcgaccacgcgctggct
gccaaggccatcaccctgcacaccaaggtgcgcgggcggtatatcggcgtcgacgaggac
ggcaatccggccccgaagatctatgagaccaccccgggtcgcatgaagctcggcgaactc
ctgccgaagaacccgaagacccccttcgacgtcgtcaacaagctgatgaccaagaaggaa
atctcgaacatgatcgacaccgtctaccgccactgcggtcagaaggagacggtcattttc
tgcgaccgcatcatgacgctcggcttctccaacgccttccgcgccggcatttcgttcggc
aaggacgacatggtggtgccgtccaagaagtgggacatggtcgaagagacccgtgcgctc
accaaggaatatgagcagcagtacaatgacggcctgatcacccagggcgaaaagtacaac
aaggtcgtcgatgcgtggggcaagtgctccgcccgcctcgccgacgagatgatggccgaa
atctcggcggtgaagaaggacccggtgacgggtcgcgagaagcagatcaactcgatctac
atgatggcgcattccggcgcgcgtggttcgcgtgagcagatgcgtcagctggccgccatg
cgcggcctgatggcgaagccgtcgggtgagatcatcgagacgccgatcatctcgaacttc
aaggaaggcctctccgtgctcgagtacttcaactcgacccacggtgcccgtaagggtctg
gctgacaccgcgctgaagaccgccaactcgggctacctgacccgtcgtcttgttgacgtg
gctcaggacagcatcatcaccctgcgtgattgcggtaccaccaacggtatcgcgatgcgc
gccattatcgatgcgggcaacatcgttgccacgctcggctcgcgcgttctgggccgcacg
gcggcggaggacgtgatcgagggcgcgaccggcaatgttatcgtgccggccggccatatg
atggacgaggcggatgtcgagcgcatcgccaaggccggcgtgcaggagatcaagatccgc
tccgtgctcacctgtgaggccaagaacggcgtctgcggaacctgctacggccgtgacctg
gcgcgcggcacgcctgtcaacatgggcgaggcggtcggcgtgatcgcggcgcagtccatc
ggcgagccgggcacgcagctcaccatgcgcaccttccacatcggcggcgcggcgcagctg
tccgaacagtccttcatcgaggcttccttcgagggcacggtgaagatccgcaaccgcaac
gtggtgcggaactcggatggcgagctgattgcgatgagccgtaacctctcggtgctcatc
gtcgatcacgacggcacggagaaggcctcgcatcgcatccagttcggcgccaagctgaag
gtggacgaaggcgatgccatcaagcgtggccagcgcatcgccgagtgggatccctatacc
cgcccgatcctcaccgaggtcgagggtatcgtgggttacgaggatctggtcgaaggtgcc
tcgctcagcgagacggtcgacgaatcgaccggtatcgccaagcgcgtcgtcaccgactgg
cgcaccggccgcggttcggaactgcgtccttcgctggtggtgaagggtgcggatggcaag
gtgctgaagctgcagcgcggcggcgatgcccgctacacgctgcctgtggatgcgatcctt
tccgccgaccccggctcgaccatcaaggcgggcgacgtgctggcgcgcgtgccgatggaa
tcggccaagacccgcgacatcacgggcggtctgccgcgcgtggcggagctgttcgaggcc
cgtcgtccgaaggatgcggcgatcatcgccgaaatctccggcacgatccgtttcggcaag
gactacaagaacaagcgccgtgtgagcattgagccgcaggactcgaacgacgagacggcg
gagtacctgatcccgaagggcaagcacatccacctgcaggatggcgacctcgtcgagaag
ggtgacttcatcgtcgacggcaacccggcgccgcacgacattctggcgatcaagggcgtc
gaagaactcgccgcctatctcgtaaacgagatccaggaagtctaccggctgcagggcgtg
ctcatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatc
gacgacgccggcgagagcgatctgctcaccaacgagcagatcgacgcttcggagctgaac
gagatcaatgagcggctgatcgccgagggcaagaagcccgcgtccggtcacccggtcctg
ctcggcatcaccaaggcgagcctgcagacacgctccttcatctcggccgcctccttccag
gagactacccgcgtgctcaccgaggcggcggtcaacggcaagtcggacgacctcgccggt
ctcaaggagaacgtcatcgtcggccgccttatcccggcgggcaccggcgcgcagatggcg
aagctccgtgtgacggcgaccacccgcgacgatctgatcgccgcgcagaacgagcaggac
agcgtcgcctccaatgctccgcgcctcgaaggtcccgccgccgccgagtga
DBGET
integrated database retrieval system
