Ancylobacter polymorphus: K9D25_18230
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Entry
K9D25_18230 CDS
T08152
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
apol
Ancylobacter polymorphus
Pathway
apol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K9D25_18230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apol03019
]
K9D25_18230
03009 Ribosome biogenesis [BR:
apol03009
]
K9D25_18230
Enzymes [BR:
apol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
K9D25_18230
Messenger RNA biogenesis [BR:
apol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K9D25_18230
Ribosome biogenesis [BR:
apol03009
]
Prokaryotic type
rRNA processing factors
K9D25_18230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Ogr_Delta
Motif
Other DBs
NCBI-ProteinID:
UOK70638
UniProt:
A0A9E7A6P6
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All DBs
Position
3801757..3804552
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AA seq
931 aa
AA seq
DB search
MANKMLIDATHPEETRVVVVRGNRVEEFDFEAANRKPLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRQALLAEEERQQRRDAEAENEDKPKGRPRRPRGAA
KSAEGDESVSEEATTETAGETEGDAAPARRSRRRRSSDEEGGGEGGEVEEIADEEEIVDE
VGSDDAMEEMPERAPPRGRARTYKIQEVIKRRQVMLVQVVKEERGNKGAALTTYLSLAGR
YSVLMPNTARGGGISRKITSAEDRKRLKEVASDLEVPEGMGVILRTAGANRTKPEIKRDF
EYLLRLWENVRELTLGSTAPSLVYEEGSLIKRSIRDLYNKDIDEVLVAGEDGYREAKDFM
RMLMPSHAKNVKIYKDLQPVFTRFGVESQLDAMFLPQVQLKSGGYLVINPTEALVSIDVN
SGRSTREHNIEDTALKTNLEAAEEVARQLRLRDLAGLVVIDFIDMDEKRNNRAVERKLKD
CLKNDRARIQLGRISHFGLMEMSRQRIRTGVLESSTEVCPHCGGTGHVRSSASVALQMLR
GAEDILQRSNTHNLIIRTRAENALYVLNHKRAHLHELEERFGVLITIAADPSLTGLTPFA
IDKGDAVPNPIPLPRPPELVFEPEDEIVGEESEDEIETEAPVEAAAEPEAGESRDAAPTA
SGDTSGEGGRRRRRRRRRRRGGGGNGENGERHAEGETGSDMSGVEFEDEGEDGEGDEPAE
TTVVADEVTAETVAQVPATDVPATDAPAEALPADAAITPAEAQDIAAAEPAPEVVTEAAA
AAAPVEDEKPRRGRRGGGRRTKAAAAEASTEAVPATEAPVAEAPAAEAPTAEAAEAAEAK
PKPRRRRSTVREKAPVAVEGDTVSESVSAAPVEAAAPEAPVAESAPEPAVAAEPAPVEAP
PAEEAPAPAAPAPEPDRPRRTGWWQRKIFGE
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagatgctcatcgacgccacccatcccgaggagactcgggtggtggtggtg
cgcggcaaccgagtcgaggaattcgacttcgaagccgccaatcgcaagccgctgcgcggc
aacatctacctcgccaaggtcacgcgggtagaaccttccctccaggccgccttcgtcgaa
tatggcggcaaccggcatggattcctcgccttcagcgagatccatcccgattattaccag
atcccggtcgccgaccggcaggccctgctggctgaggaagagcgccagcagcggcgcgac
gccgaagccgagaacgaggacaagcccaagggccgtccccgccggccgcgcggcgccgcc
aagtccgccgagggcgacgagagcgtttccgaggaagccacgaccgaaaccgccggcgag
accgagggcgacgccgccccggcgcggcgttcgcgccgtcgccgctcgtccgatgaagaa
ggcggtggcgagggcggcgaggtcgaggagatcgccgacgaggaagagatcgtcgacgag
gtcggctccgacgacgccatggaagaaatgccggagcgcgccccgccgcgcggccgggcc
cgcacctacaagatccaggaagtgatcaagcgccggcaggtgatgctggtgcaggtggtc
aaggaagagcgcggcaacaagggcgcggcgctcaccacctatctctcgctcgccggccgc
tattcggtgctgatgcccaacacggcgcgcggcggcggcatctcccgcaagatcacctcg
gccgaggaccgcaagcggctcaaggaggtcgcctccgacctcgaagtgccggagggcatg
ggcgtcatcctgcgtaccgccggcgccaaccgcaccaagccggagatcaagcgcgacttc
gaatatctcctgcgcctgtgggagaatgtgcgcgagcttactctgggctccaccgcaccg
tcgctggtctatgaggaaggctcgctgatcaagcgctccatccgcgatctctacaacaag
gacatcgacgaggttctcgtcgccggcgaggacggctaccgcgaggccaaagacttcatg
cgcatgctcatgccgagccatgcgaagaacgtgaagatctacaaggatctgcaaccggtg
ttcacccgctttggggtggagagccagctcgacgcgatgttcctgccgcaggtgcagctg
aagtctggcggctatctcgtcatcaacccgaccgaagcgctggtctccatcgacgtgaac
tccgggcgctcgacccgtgagcacaatatcgaggacacggcgctgaagaccaatctggag
gccgccgaggaggtggcccgccagctgcgcctgcgcgaccttgccggccttgtcgtgatc
gacttcatcgacatggacgagaagcgcaacaaccgggcggtggagcgcaagctcaaggac
tgcctgaagaacgaccgcgcccgcatccagctcggccgcatctcgcatttcggcctgatg
gagatgagccgccagcgcatccgcaccggcgtgctcgaatcctccaccgaggtgtgcccg
cattgcggcggcaccggccatgtgcgctcgtccgcgtcggtcgcgctgcagatgctgcgc
ggcgccgaggacattctccagcgctccaacacgcataacctgatcatccgcacccgcgcg
gaaaacgcgctctatgtgctcaaccacaagcgcgcgcatctgcacgagctggaagagcgc
ttcggcgtgctgatcaccatcgcggccgacccgtcgctgaccgggctcacccccttcgcc
atcgacaagggcgacgcggtgccgaacccgatcccgctgccgcgtccgcccgagctggtg
ttcgagccggaggacgagatcgtcggcgaggagagcgaggacgagatcgagaccgaggcg
ccggttgaagccgccgccgagcccgaggccggcgagagccgcgacgcggcacccacggcc
tccggcgacacgtccggcgaaggcgggcgccgtcggcgccgtcggcgccggcgtcggcgc
ggcggtggcggcaatggcgagaatggcgagcgccatgccgagggcgagaccggttcggac
atgtccggcgtcgagttcgaggatgaaggcgaggacggcgagggcgatgagcccgccgag
accaccgtggtcgcggacgaggtgacggccgagactgtcgcccaggtcccggcaaccgac
gtgccggcgaccgacgcgccggccgaggctctgcccgcggacgcggcgatcacgccggcc
gaggcgcaggacattgctgcggcggaaccggcccctgaagtcgtgaccgaggccgctgcg
gccgccgcgcccgtcgaggacgagaagccgcgtcgcggccgtcgcggcggcggacgccgt
accaaggcggcggcagccgaggccagcacggaggccgtgccggccaccgaagctcctgtc
gcagaagcccctgcagcggaagcgccgacggccgaggcggcggaagctgccgaggcgaag
cccaagccccgccgccgccgttcgacggtgcgcgagaaggcgccggtcgcggtggaaggc
gatacggtgagcgaaagcgtgagcgcggcgcccgtggaagcggcggcgccggaagccccg
gtcgcggaaagcgcgccggaaccggccgttgccgccgagccggcgccggtggaggcgccg
ccggctgaggaggcacccgctcctgctgctccggccccggagcccgaccgcccgcgccgc
accggctggtggcagcgcaagatattcggcgagtga
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