Ancylobacter polymorphus: K9D25_18585
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Entry
K9D25_18585 CDS
T08152
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
apol
Ancylobacter polymorphus
Brite
KEGG Orthology (KO) [BR:
apol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apol03016
]
K9D25_18585 (rnd)
Enzymes [BR:
apol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K9D25_18585 (rnd)
Transfer RNA biogenesis [BR:
apol03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K9D25_18585 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UOK70703
UniProt:
A0A9E7CV60
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All DBs
Position
3881623..3882801
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AA seq
392 aa
AA seq
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MNMITTTDDLAAACERLARHPFITIDTEFLRETTFWPKLCVVQLASVDEALVVDALAEGL
DLAPFFALMSNPDVLKVFHAGRQDIEIVWHLAGIIPTPVFDTQVAAMVLGHGDSISYDQL
VQRLTGEVLDKSLRFTDWSRRPLSAAQVAYAEADVTHLRDVFLKLDADLKKRGRADWVGE
EMAVLTSPDTYRQEPERAWERLRSRARKPKDLAVLMEVAAWREREAQSRDTPRSRILKDD
VIGEIASQHPTTIEKLGQLRAIPKGFERSRAGEMIVEAVKAGLARDPKTLPRIERDRPLS
NGASATVELLKVLLRMTSEQHGVAAKVIATVDDLERIASEDAPDVGALRGWRGELFGDRA
MALKSGRLALAMQRGRVIAIERTALDKAGAAD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatcacaaccaccgacgacctcgccgcggcctgcgaacgcctcgcccgccat
ccgttcatcaccatcgacacggaattcctgcgcgaaaccaccttctggcccaagctctgc
gtcgtgcagctggccagcgtggacgaggcgctggtggtcgacgcgctggccgaggggctc
gacctcgcgccgttcttcgcgctgatgtcgaatccggacgtgctgaaggtgttccacgcc
ggccggcaggacatcgaaatcgtctggcacctcgccggcatcatcccgaccccggtcttc
gacacccaggtcgcggccatggtgctcggccatggcgattccatctcctatgaccagctg
gtgcagcgcctcaccggcgaagtgctcgacaagtcgctgcgcttcaccgactggtcgcgc
cgcccgctctcggcggcgcaggtcgcctatgccgaagccgatgtcacccatctgcgcgat
gtgttcctcaagctcgacgctgacctgaagaagcgcggccgcgccgactgggtgggcgaa
gagatggccgtgctcacctcgcccgacacctaccggcaggagcccgagcgcgcttgggag
cggctgcgctcgcgcgcccgcaagcccaaggacctcgccgtgctgatggaagtcgccgcc
tggcgcgagcgcgaggcgcagtcgcgcgacacgccgcgctcgcgcattctcaaggacgac
gtgatcggcgagatcgcctcgcagcacccgaccaccatcgagaagctgggccaattgcgc
gcgatccccaagggtttcgagcgctcccgcgccggcgagatgatcgtcgaggcggtgaag
gccggcctggcccgcgaccccaagaccctgccgcgcatcgagcgcgaccggccgctgtcc
aacggcgcctcggcgacggtggaactgctgaaggttctgctgcgcatgacctccgagcag
cacggcgtcgccgccaaggtcatcgccacggtggacgatctggagcgcatcgcctcagag
gacgcgcccgatgtaggggcgctgcgcggctggcgcggcgaattgttcggcgatcgcgcc
atggcgctgaaatccggccggctggcgctcgccatgcagcgcgggcgggtcatcgccatc
gagcggaccgcactggacaaggcgggtgcggcggactga
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