Acetobacter pomorum: CPF11_01140
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Entry
CPF11_01140 CDS
T05180
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
apom
Acetobacter pomorum
Pathway
apom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPF11_01140 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apom03019
]
CPF11_01140 (recQ)
03400 DNA repair and recombination proteins [BR:
apom03400
]
CPF11_01140 (recQ)
Enzymes [BR:
apom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPF11_01140 (recQ)
Messenger RNA biogenesis [BR:
apom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CPF11_01140 (recQ)
DNA repair and recombination proteins [BR:
apom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CPF11_01140 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATI11181
LinkDB
All DBs
Position
238791..240671
Genome browser
AA seq
626 aa
AA seq
DB search
MTETGSISTPSQFSHNRLERDRFAGKPPQEVLQAVFGFPGFRSLQAQAVECVMEGRDTLV
LMPTGGGKSVCYQIPALCREGMGLVISPLIALMDDQVAGLRQLGINAAALHSELEGDEAA
KIRSDLANGRIDLLYISPERLLSSGTLDRLVRIPLSVIAIDEAHCISAWGHEFRPEYRAL
TALPRHFPHVPRIALTATADERTREDILTALDMPHAEVLVSSFHRPNLNISVQPKASETR
QLITALERHKDAASIVYCGSRARTERMAASLRERGWPALAYHAGLSPIEKRAALLRFRSG
EPLVIVATVAFGMGIDRPDVRAVVHLDMPSSPEAYYQQIGRAGRDGLPSDTLLLYGGEDM
ARARYWLDQSAAPESEKRIMRSRLEAMIALTETTGCRTRALLHCFGEELAEPCGHCDNCL
HPVLTFDGTEAARKLLSAVYRTGQCFGALHVISVLRGKTTEAVKRNGHDKLTVWGIGKDK
SEQFWRGVVRQLIARGALRTEGQYGGLILNQNVARPILRGEEDIHLRADPVVETASRISD
RSSQSAGITLTEDSKALFDALRQWRREEAQEQEIPPYVIFHDSVLRDIAMEKPSDLDELG
DIKGVGRSKLERYGEAVLEVLETAQA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaccggctccatatccacgccctctcagttttcacataacaggctggaacgg
gatcggtttgctggcaaaccgccgcaggaggttctgcaggcggtttttggctttccgggt
ttccgcagccttcaggcgcaagccgttgaatgcgttatggaaggcagagatacactggtg
cttatgccaaccggcggcggcaaaagtgtttgttaccaaatacccgccctgtgccgcgaa
ggcatggggctggttatttccccccttattgcccttatggatgatcaggttgcaggcctg
cgccaacttggcatcaatgcagcggcccttcattctgaactggaaggggatgaagccgcc
aaaatcagatccgatctggcaaatgggcggatagacctgctgtatatttccccagaacgg
ctgctttcatccggcacgctagacaggcttgtgcgcataccgctttcggttatcgctatt
gatgaggctcattgtatttcggcatgggggcatgagttccggccagaataccgcgccctt
acagcgttgccacgccattttccgcatgtgccacgtattgcccttaccgctaccgcggat
gaacgcacgcgagaagatattctaacggcgctggatatgccgcatgccgaggtgctggtt
tccagctttcatcggcctaatctcaacatttccgtgcagcccaaagcgtctgaaacccgc
cagcttattacagcactggaacggcataaggatgccgccagtattgtatattgtggcagc
cgtgcccgcacagagcgcatggccgcttctctgcgtgaacgcgggtggcctgccttggcc
tatcacgccgggctttcccccatagaaaaacgtgccgcgctcctgcgttttcgatctggt
gaacctcttgttattgttgccactgtcgcctttggcatgggcatagataggccagacgtg
cgcgctgtcgtgcatctggacatgccatcctcgccagaggcctattatcagcaaattggt
cgggcagggcgtgatggcctgccatctgacacacttctgctgtacggcggggaggacatg
gctcgcgcccgttattggctggatcaatccgccgcaccagaaagcgaaaaacggattatg
cgcagccggctggaagccatgatcgcactaaccgaaaccacgggttgccgcacccgtgcg
ttattgcattgttttggtgaagaattggccgaaccctgcggccattgcgataactgccta
catccggtgctaacatttgatggcacagaagccgcccgcaagctgctttctgctgtgtat
cgcacggggcaatgttttggtgcactacatgttatcagtgtgctgcgcggcaaaaccaca
gaagccgttaagcgtaatgggcatgacaagctgactgtgtggggtattggtaaggataaa
agcgagcagttctggcgcggcgtggtgcgtcagcttattgcgcgtggggccttgcgcaca
gaaggccaatacggcggcctgattttaaaccagaatgtagcgcgccccattttacgcggt
gaggaagacattcacctacgtgcagatcctgtagtggaaacagccagccgcatatcagac
cgcagcagccaaagcgcaggcattacccttacggaagatagcaaagccctgtttgatgcc
ctacgccaatggcgccgggaagaagcgcaggagcaggaaattccgccttacgttattttc
catgattccgtgctgcgcgatatcgccatggaaaaaccctcagatttggatgaactggga
gatatcaaaggggtagggcgctccaaactggaacggtatggagaagccgtgctggaggtt
cttgagacagcgcaggcatga
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