Entry |
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Name |
(GenBank) 3'-5' exonuclease
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KO |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:apom00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:apom03016]
CPF11_04030
Enzymes [BR:apom01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CPF11_04030
Transfer RNA biogenesis [BR:apom03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CPF11_04030
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
850503..851156
|
AA seq |
217 aa
MTSAPSEGAITLHRNDLPDNVTFTGSVAVDTETMGLNPHRDRLCLVQLSAGDGTAHLVQI
IPTSLGGKGYDCPNLKRVMADPSITKIMHFARFDVAILQHALGITVSPVVCTKIAARLVR
TFTDRHGLAALCRDMLGVELSKQQQTSDWGTLELKPEQLAYAASDVLYLHALWDKMSALL
DREGRRELAQACYDFLPARARLDLLGYEDPDIFSHRA |
NT seq |
654 nt +upstreamnt +downstreamnt
atgacctctgccccatccgaaggtgccattacactgcaccggaacgatcttccagacaac
gtgacctttaccgggtccgtggccgtggatacggaaacaatgggcctgaacccgcatcgg
gatagactgtgccttgtgcagctttctgccggtgatggcacagcgcatctggtacagatc
atccccacctcccttgggggcaaagggtatgattgtcccaacctcaagcgtgtgatggct
gatccctccattaccaagatcatgcattttgcacggtttgacgttgccatcctgcagcac
gcgctgggcattaccgtaagcccggtggtgtgcaccaaaattgccgcccgccttgtgcgc
acctttacagaccgccacggccttgccgccctgtgccgggatatgctgggggtagaactc
agcaaacagcagcagacatcagactggggcacgctggaactgaagcccgaacagttggct
tatgctgcatctgatgtgctgtatctgcacgcattgtgggataaaatgtccgccctgctg
gatcgtgaaggccggcgggaactggcacaggcatgctatgacttcctgcccgcccgcgca
cgtctggatctgctgggctatgaagacccggatattttctctcaccgcgcgtaa |