Acetobacter pomorum: CPF11_05110
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Entry
CPF11_05110 CDS
T05180
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
apom
Acetobacter pomorum
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apom03400
]
CPF11_05110
Enzymes [BR:
apom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CPF11_05110
DNA repair and recombination proteins [BR:
apom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CPF11_05110
Prokaryotic type
CPF11_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATI13373
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All DBs
Position
1068065..1069486
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AA seq
473 aa
AA seq
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MVNAPSPAPVLVLLRDDYRVADNPALHAACATGQPVLCAYVQDAALQDAPTTRIAGWAQA
ACAQLATSLHKQGQTLLMLSGPTRLSVPALAQAINATDVFWNRRYDAPGIAADTDVHASL
KKQGVTVHSCTGRLLFEPWAIRTQAGQPYRVFTAWWRAARDLPEPPPPLPAPDMHGKSYV
PARALNLPEGVRLARVGTQMPPALPGWTSGEQCAHTNLHRFIENALEDYETQRDRTDATH
GTSLLSPYIRVGQISVRQIWHAIRHAAHLHPQLATDAEKFLAELGWRDFAWMQMFTTPDL
ATRNLRAEFNHMPWRTDATDLAAWQQGQTGFPLVDAGMRQLARTGWMHNRVRMVVASFLT
KHLLTDWQKGERWFYAHLLDADAAVNAMNWQWGAGTGIDAAPWFRIFNPVGQSEKYDPLG
QYIRTWVPELAALDNKTIHTPWKSAQRLNYPPPIVDLKLGRLRALECWKNLPK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcaccctcccccgcccctgttctggttttgctacgagatgattaccgcgtg
gctgataacccagccctgcacgcggcctgcgcaacggggcagcccgtgctgtgcgcctat
gtgcaggatgccgccttgcaggatgcccccaccacccgcattgcaggttgggcgcaagcc
gcgtgtgcgcaactggccaccagtttgcataaacaggggcagactttgttaatgttatcc
ggcccaacgcggctttctgttcccgcattggcgcaggccataaatgctacagatgtgttc
tggaaccgtcggtatgatgcgccgggcattgcggcggatacggatgtgcatgcaagcctg
aaaaaacagggggtgacagtacactcatgcaccggccgtttgttgtttgaaccctgggcc
atacgcacgcaggcgggccagccataccgtgtgtttaccgcatggtggcgcgccgcgcgg
gatttgccagaaccgccgcctccactgccagcaccagatatgcacggtaaaagttatgtg
cctgctcgcgccctcaatttgccagaaggcgtgcgccttgcccgcgttggcacgcaaatg
ccccccgccctgcccggctggacaagcggagaacaatgcgcccacaccaacctgcaccgg
tttatagaaaacgcgctagaagattatgaaacacagcgagacagaaccgatgccacacat
ggaacatctctgctttcaccttatattcgggtggggcagatttctgtgcgccagatctgg
catgccatccgccatgctgcacacctgcacccacaactggccacagatgccgaaaagttt
ttggcagaactaggctggcgtgattttgcgtggatgcagatgttcaccacaccagacctt
gccacccgcaacctgcgcgctgaatttaaccacatgccgtggcgcacggatgccacagat
ctggcagcatggcagcaggggcaaacggggtttccgctggtagatgccggtatgcgccaa
ctggcccgcacgggctggatgcacaaccgcgtgcgcatggttgtggcctcctttttaacc
aaacatctgctgacagactggcaaaaaggagaacgctggttttatgcacacctgttggat
gcagatgccgccgtaaacgccatgaactggcaatggggcgctggcacaggcattgatgcg
gcaccgtggttccgtatttttaacccggtggggcaatctgaaaaatatgatccattaggc
caatatattcgtacatgggtgccagaactggcggcgctggataacaaaaccatccacacc
ccttggaaaagcgcgcaacgtttaaattacccgcccccgattgtagaccttaagctgggc
cgcctacgtgcattggagtgttggaaaaacctgcccaaatag
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