Acetobacter pomorum: CPF11_07085
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Entry
CPF11_07085 CDS
T05180
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
apom
Acetobacter pomorum
Pathway
apom03030
DNA replication
apom03430
Mismatch repair
apom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPF11_07085
03430 Mismatch repair
CPF11_07085
03440 Homologous recombination
CPF11_07085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apom03032
]
CPF11_07085
03400 DNA repair and recombination proteins [BR:
apom03400
]
CPF11_07085
Enzymes [BR:
apom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPF11_07085
DNA replication proteins [BR:
apom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPF11_07085
DNA repair and recombination proteins [BR:
apom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPF11_07085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_30
AAA_5
AAA_16
AAA_14
AAA_19
AAA_18
DUF815
AAA_assoc_2
TIP49
Mg_chelatase
DEAD
nSTAND3
SRP54
PIF1
TsaE
Motif
Other DBs
NCBI-ProteinID:
ATI13404
LinkDB
All DBs
Position
complement(1498410..1500404)
Genome browser
AA seq
664 aa
AA seq
DB search
MSDKTDAQLPQDEGLPNPEMEGPGLFGDEPAQQVVEQLPATQDQTASPYRVLARKYRPTT
FDDLIGQEAMVRTLRNAFALGRVAHAFMLTGVRGVGKTTTARIIARALNCIGPDGKGGPT
ADPCGVCANCVAILNDRHPDVLEMDAASRTGVDDVREIIDATRFRPMQGRMKVFIIDEVH
MLSRNAFNALLKTLEEPPAQVTFIFATTELRKVPVTVLSRCQRFDLRRVPQSELVGLFSR
IADKEHVRLSPDALALVARAADGSVRDGLSLLDQAIAQGTGQTDADGVIGATVISDMLGL
ADREVVFDLLEAVLTGKPEQALALLDAAYARGADPGLVLGDMLELVHTVSRLRAVPSLRD
SADMPEAERVRGTHMADTFTVPVLMRAWQMLVKGMQEVEAASDRRAAADMVLIRLCYVAD
LPSPEDLIKRLSGAGHSAGQGVASPNTGGSSQAPTAGASSALPTPSASAGHQPPPLRMVS
GGQSVSAAVPVVAPVSAPSPEPQVFPNPRTWREAVALVKDQKEAILHGQLRHAAHLVSFA
PGHIVLRFEQHVPSGAAQELRKVLDRATGMSWRVGLSEEEGEPTLDAQGAEIIQFRRKEA
EAHPLVKAILKFFPDAELGEVRDHGLDDYGLPPEEPAPELLFAPLDAEFLDDDERPYDPG
MSPD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaaacagacgcgcagcttcctcaggatgagggactccccaatcctgaaatg
gaaggccctggtctgtttggtgatgagcctgcccaacaagtggttgagcagcttcccgca
acgcaggatcagacagcatcgccgtaccgggtgctggcccgtaaatatcgccccaccaca
tttgatgatctgattggccaggaagccatggtgcgcacgctgcgtaatgcgtttgcactg
gggcgggtggcccacgcgtttatgcttacaggtgtgcgcggggtgggtaaaaccaccacg
gcccgtattattgcacgcgctcttaattgcatcgggccagatggcaaaggtggcccaacg
gcagatccatgcggtgtttgcgcaaactgtgtggctattttgaacgatcggcacccagat
gtgctggaaatggatgctgcctcccgcacaggtgtagatgatgtgcgtgagattatagac
gccacgcgcttccgccccatgcaagggcgcatgaaggtctttattattgacgaagtgcat
atgctttctcgcaatgccttcaatgcgctgctcaaaacgctggaagagccgcctgcacaa
gttacgtttatttttgccacgacagaactgcggaaggtgccggtaacggtgctttcgcgt
tgccagcggtttgatttacggcgcgttccacaatctgaactggtggggttattctcccgc
atcgcagataaagagcatgtgcgtctgtcaccagatgcgctggcattggtagcacgggct
gctgatggctcggtgcgtgatgggctttccttgttggatcaggctattgcgcagggtacc
ggccaaacggatgcagatggtgtaattggcgccacagttatcagtgacatgctgggtttg
gcagatcgggaagttgtgttcgatctgctggaagcggtgttaacaggcaagccagagcag
gctttggcgttgctggatgcagcatatgcacgcggcgcagaccccggccttgtgttgggg
gatatgctggaactggtgcacactgtttctcgtttgcgggccgttcccagcttgcgcgat
tcggcagatatgccagaggccgagcgtgtgcggggcacgcatatggctgatacctttact
gtgcctgtgctgatgcgtgcgtggcagatgctggtaaaagggatgcaggaagtggaagcc
gcatctgataggcgcgctgccgcagatatggtgctgattcgcctgtgttatgtggcggat
ctgccatctcctgaagatttaataaaacgtctttctggcgcggggcattcagcagggcag
ggagtagcttctccaaatacaggtggaagttctcaagcccccacggctggggcaagttct
gcgttgcctacgccatcagcttcagcagggcatcagccgccgccattgcgtatggtgagt
ggtggacaaagtgtttctgccgccgtgccagtcgttgctccggtttctgctccctctcct
gaaccacaggtttttcccaacccacgcacatggcgagaagccgtggctttggtgaaggac
cagaaagaagccatcctgcacggtcagcttcggcatgcggcgcatctggtgtcctttgcg
ccggggcatattgtgttgcggtttgagcagcacgtgccctctggggccgcgcaagaactg
cgtaaagttttggatcgtgccacgggtatgtcatggcgggtggggctttcggaggaagag
ggcgaacccacgctggatgcgcagggggctgaaatcattcagtttcggcgtaaggaagct
gaagctcacccattggtgaaggccattctcaagtttttcccggatgcagaactgggcgaa
gtgcgtgatcatggtttggatgattacggcctaccgccagaagaaccggccccagaactg
ctttttgcaccgttggatgcagagtttctggatgatgatgaacgcccctatgatccgggc
atgtctccagactga
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