Acetobacter pomorum: CPF11_08230
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Entry
CPF11_08230 CDS
T05180
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
apom
Acetobacter pomorum
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apom03021
]
CPF11_08230
03009 Ribosome biogenesis [BR:
apom03009
]
CPF11_08230
Transcription machinery [BR:
apom03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CPF11_08230
Ribosome biogenesis [BR:
apom03009
]
Prokaryotic type
rRNA transcription factors
CPF11_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
DUF4332
Motif
Other DBs
NCBI-ProteinID:
ATI12440
LinkDB
All DBs
Position
1738051..1739595
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AA seq
514 aa
AA seq
DB search
MDTSVSRPELLLVADAVSREKGIEREEVLEAMEQAIQKAGRAKYGHEKDIRATIDRKTGD
VRLSRWTEVVDEVENEDTQIALSIARKFRPEIQAGEYLIDPLPPIDFGRIAAQTAKQVIV
QRVREYERKRQYNEFKDRVGEIVNGTVKRTEYGNLLVEIGSAEALLRRDELIPRETFRNS
DRVRAYIYDVRDEPRGPQIFLSRTHPAFLAKLFAQEVPEIYDGIIEIKAVARDPGSRAKM
AVISRDASIDPVGACVGMRGSRVQAVVAELQGEKIDIIPWSPQAATFVVNALAPAEVSKV
VMDEEAGRVEVVVPDEQLSLAIGRRGQNVRLASQLTRWDIDILTEAEESERRQEEFRRRT
ALFVEALDVDDVIAGLLVTEGFHSIEELAFADPDELIGIEGFDESVVQELVQRAESYLVQ
QEQKLDDRRKELGVVDDIADMGVFTNQMLVTLGEKGVKTLDDLADLAGDELVEILGTDAI
EEDAANEIIMAARAHWFEDENQQPSDTKEGEANA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatacctctgtttcccgtcctgaacttttgctggttgcagacgctgtctcgcgcgag
aaaggtattgagcgtgaagaagtgctggaagccatggagcaggcgatccagaaagccgga
cgcgccaaatatgggcacgaaaaggacattcgtgctaccatcgaccgcaagacaggtgat
gtgcgcttgtcccgttggacggaagtggtggatgaagtggaaaatgaagatacgcagatt
gcgctctccattgcccgtaagtttcgcccagaaattcaggcaggcgaatacctgatcgat
ccgctgcccccgattgattttgggcgtattgccgcgcaaaccgccaagcaggtgattgtg
cagcgcgtgcgtgaatatgaacgcaagcgccagtataacgaattcaaggaccgcgtgggt
gaaattgtaaacggcaccgttaagcggaccgaatacggcaatctgctggttgaaattggt
tcggcagaagcgctgctgcgacgtgatgagttgatcccgcgtgaaacgttccgtaactcg
gatcgcgtgcgcgcctatatctacgatgtgcgtgatgagccgcgtggaccgcagattttc
ctttcccgcacgcatccggcctttttggccaagctgtttgcgcaggaagtgccagaaatt
tatgatggcattattgaaattaaagccgttgcgcgtgaccctggttctcgcgccaaaatg
gccgtgatttctcgtgatgcgtctatcgatcctgtcggggcttgcgttggtatgcgtggt
tcccgtgtgcaggccgttgtggccgaattgcagggcgaaaagattgatatcatcccgtgg
agcccgcaggccgctacttttgtagtgaatgcgctggcgcctgctgaagtcagcaaggtg
gtgatggatgaagaagccggtcgcgtagaagtggttgtgccggatgagcagctttctttg
gctattggccgtcgtgggcagaatgtccgtctggctagccagttgacgcgttgggatatt
gatattctgacagaagcggaagaatccgaacgccgtcaggaagagttccgccgtcggaca
gcgctgtttgttgaagcgctggatgtggatgacgtaattgcaggtctgctggtcacggaa
ggcttccattccatcgaagaactggcttttgcagatccagatgagctgattggcattgaa
ggatttgacgagtcggtcgttcaggagctggttcagcgtgctgaatcttacctcgttcag
caggaacaaaagctggatgatcggcggaaagagctgggtgttgtggacgatattgccgat
atgggcgtgtttacaaaccagatgcttgtgacattgggtgaaaagggtgtaaaaacctta
gacgaccttgcagatctggccggtgatgaactggttgagatcttgggcaccgatgccatt
gaggaagatgccgccaatgaaatcatcatggcagcacgagctcattggtttgaggatgaa
aatcagcagccttccgataccaaggaaggtgaggccaacgcctga
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