Acetobacter pomorum: CPF11_08555
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Entry
CPF11_08555 CDS
T05180
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apom
Acetobacter pomorum
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apom03016
]
CPF11_08555
Enzymes [BR:
apom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CPF11_08555
Transfer RNA biogenesis [BR:
apom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPF11_08555
Prokaryotic type
CPF11_08555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ATI13420
UniProt:
A0AAN1PKK0
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All DBs
Position
1811941..1812858
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AA seq
305 aa
AA seq
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MRRRRGRPLNGWLIVDKPSGMTSTQVVGRAKRLFDAQKVGHGGTLDPLATGLLPLAFGAA
TKTVPYVMDGTKVYRFTLKMGEARDSDDADGNVIGTSDVRPSDEELRAALPALTGDIMQV
PPVFSALKVGGERSYDMAREGRPPELPPRPARVDRFELIERPDRDTAVFEVESGKGVYMR
ALARDVALACGTVGHITVLRRLRVGPFTEADAIVLDKITPNDDNAHASPELLRPVSTALA
DIPALALTQDEAVLLRHGQALGLVDLMGRIPQTAEEGGVVRVMDGEHVLGIGRLEDGWLK
PVRIL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcagacgtgggcggccacttaatggctggcttatagtagacaagccttccggc
atgacatcaacacaggtagtagggcgcgccaaacggctgtttgatgcacaaaaagttggg
catggcggcacactcgatccactggcgacgggtttgctgccactggcttttggtgccgct
acaaaaaccgtgccttacgtgatggatggaaccaaggtgtaccgcttcactcttaaaatg
ggtgaagcgcgagatagcgatgatgccgatggcaatgttattggtacatctgatgtgcgg
ccttctgatgaagaactgcgagcagccttacccgcgcttacgggtgatatcatgcaggta
cctcctgttttttctgctttgaaagtggggggagagcgttcttacgatatggcgcgagaa
ggtcgtccgccggaattgccgccgcggcccgcacgcgtagatcggtttgaactgatcgag
cggccagatcgggatacagcagtgtttgaagtcgaatccggcaagggcgtttatatgcgt
gcgctggcgcgtgatgtggctttggcatgcggaacagtgggacatattaccgtgctgcgc
cgcctgcgtgtggggccttttacagaagccgatgcgattgtgctggacaaaatcacccca
aacgacgacaacgcccatgcttcaccggaacttctgcgtccggtctcgaccgcgctggcc
gacatcccggcgctggccttgacacaggatgaagcggttctgctacggcacgggcaagct
ctcggccttgttgatctgatggggcgtatcccacagaccgccgaggaggggggcgttgtg
cgtgttatggacggtgagcacgtgctgggtattggccgcctggaagacgggtggttgaag
ccggtacggattctctaa
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