Acetobacter pomorum: CPF11_09165
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Entry
CPF11_09165 CDS
T05180
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
apom
Acetobacter pomorum
Pathway
apom00540
Lipopolysaccharide biosynthesis
apom01100
Metabolic pathways
apom01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CPF11_09165 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
apom01005
]
CPF11_09165 (rfaD)
Enzymes [BR:
apom01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CPF11_09165 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
apom01005
]
Core region
CPF11_09165 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
KR
Motif
Other DBs
NCBI-ProteinID:
ATI12599
LinkDB
All DBs
Position
complement(1940342..1941322)
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AA seq
326 aa
AA seq
DB search
MIVITGGAGFIGSCLQAALAARGLETIIVDWLGQEGKWRNVSQHAPTRLIAPENLKDFLA
TTPKIDTIFHMGAISETTATDGDLVWRTNVELSQTLWDWCTRNRARFIYASSAATYGAAD
KPELFNDDPGHLSQLRPLNLYGWSKHVFDQHVTTTLDQHTPRPPQWAGLKFFNVYGPNEY
HKGKMISVVKVKYDEVKSGQPARLFRSDRPDIADGMQARDFIWVGDVVNVMLWLYDNPEV
SDLFNCGTGTARTYLDLAHAVCDAIGCERQIEFIDMPQSLRGQYQSYTQADLSRLRAAGY
TGQFTSLEEGVKRYVQDYLATDNPYL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatagtaattacagggggagccggttttatcggctcatgcctacaggcagcattggcc
gccagagggctggaaaccataattgttgattggcttgggcaggaaggcaaatggcgcaat
gtgtcccaacatgcaccaacacgcctgattgccccagaaaacctaaaagattttctggcg
accacccccaaaatagacaccatcttccatatgggcgctattagtgagaccaccgcaaca
gatggtgatctggtgtggcgcaccaatgtcgaactctcgcaaacactctgggactggtgc
acacgcaaccgcgcaagatttatttatgcgtcttccgccgccacatatggcgcggcggat
aaacccgaactttttaatgatgatccggggcatctttcacaactgcggccactcaatttg
tacggctggtccaaacacgtgtttgatcaacacgttaccaccacgctggatcagcacaca
ccgcgcccgccacaatgggccgggctaaagttctttaacgtttacgggccgaacgaatac
cacaaaggcaaaatgatctctgtggtgaaagtgaagtatgatgaggttaaatctggccaa
cccgcccgtttgttccgatctgataggccagacattgcagatggcatgcaggcccgtgac
ttcatatgggtgggtgatgtcgtaaacgttatgctctggctgtatgataacccggaggta
tcagacctgtttaactgcggcaccggcacagcacgcacgtatctggatctggctcatgcc
gtgtgcgatgctattggctgcgagcgccagatagaatttattgatatgccccaaagcttg
cgtgggcagtatcaatcctacacacaagcagatctttcccgcctgcgggccgctggttac
actggccagttcacatcgctggaagagggcgttaaacgctacgtgcaagattatcttgcc
acggataatccctatctctga
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