Acetobacter pomorum: CPF11_10515
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Entry
CPF11_10515 CDS
T05180
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
apom
Acetobacter pomorum
Pathway
apom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPF11_10515 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apom03400
]
CPF11_10515 (recO)
DNA repair and recombination proteins [BR:
apom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPF11_10515 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPF11_10515 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ATI12835
LinkDB
All DBs
Position
2223859..2224650
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AA seq
263 aa
AA seq
DB search
MMDKGGTSYEKEAPALVLFAGVQGETSARIHVLTEDYGPLRGIAYGGASKAGRALWQPGN
VVKTSFHKRSAAAPLQISGELLYACAARLLDAPLALGMVQSVCVLADVTLPEADPCPFLF
AETVRLLTFLGYDPVVAEREGMPHVVRWEMALLVTLGFGLDLSACAVTGSTENLHYVSPR
TGRAVSEEGAGEWKDRLLPLPSFLRDTEQTGHAADWLAGLRLTGHFLARDAFGQRHLPLP
AARQRLYDRLEMRVLADQTPITE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacaagggcgggacttcctatgaaaaggaggctcccgcccttgtgctttttgca
ggtgtgcagggcgaaaccagcgcacgcatacacgttttaacagaagattacggccctctg
cggggtatagcctatggcggtgccagtaaagcgggccgcgccctatggcaaccgggcaat
gtggttaaaaccagctttcataaacgcagcgccgcagcaccattacaaatttctggcgaa
ctactttacgcctgtgctgcacgattgctggatgctccgctagcgctaggcatggtgcaa
tctgtttgtgtgttggcggatgttacgttgccagaagctgatccttgcccatttcttttt
gcagaaactgtgcgtttacttacctttttggggtatgatcctgttgttgcagaacgggaa
ggtatgccacacgtagtgcggtgggaaatggcactgctggtaactttaggttttgggctg
gacctttccgcttgtgcggttaccggtagcacagaaaatctacattatgtctcaccacgt
acggggcgcgcagttagtgaggaaggtgcaggagagtggaaagatcggcttttgccactt
ccgtcttttttgcgagatacagaacaaaccggtcatgcggcagattggttggcaggttta
cgcctaacaggccattttctggcgcgcgatgcctttggccagcgccatttacccttaccc
gcagcacgccaacggctctatgatcggctggaaatgcgtgttctggcagaccaaacacct
ataaccgagtag
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